3krf: Difference between revisions

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{{Seed}}
[[Image:3krf.jpg|left|200px]]


<!--
==Mint heterotetrameric geranyl pyrophosphate synthase in complex with magnesium, IPP, and DMASPP (I)==
The line below this paragraph, containing "STRUCTURE_3krf", creates the "Structure Box" on the page.
<StructureSection load='3krf' size='340' side='right'caption='[[3krf]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3krf]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mentha_x_piperita Mentha x piperita]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KRF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KRF FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DST:DIMETHYLALLYL+S-THIOLODIPHOSPHATE'>DST</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IPE:3-METHYLBUT-3-ENYL+TRIHYDROGEN+DIPHOSPHATE'>IPE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PPV:PYROPHOSPHATE'>PPV</scene></td></tr>
{{STRUCTURE_3krf|  PDB=3krf  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3krf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3krf OCA], [https://pdbe.org/3krf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3krf RCSB], [https://www.ebi.ac.uk/pdbsum/3krf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3krf ProSAT]</span></td></tr>
 
</table>
===Mint heterotetrameric geranyl pyrophosphate synthase in complex with magnesium, IPP, and DMASPP (I)===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9SBR3_MENPI Q9SBR3_MENPI]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_20139160}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 20139160 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kr/3krf_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_20139160}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3KRF is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Mentha_x_piperita Mentha x piperita]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KRF OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3krf ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:20139160</ref><references group="xtra"/>
</StructureSection>
[[Category: Dimethylallyltranstransferase]]
[[Category: Large Structures]]
[[Category: Mentha x piperita]]
[[Category: Mentha x piperita]]
[[Category: Chang, T H.]]
[[Category: Chang T-H]]
[[Category: Hsieh, F L.]]
[[Category: Hsieh F-L]]
[[Category: Ko, T P.]]
[[Category: Ko T-P]]
[[Category: Wang, A H.J.]]
[[Category: Wang AH-J]]
[[Category: Isoprene biosynthesis]]
[[Category: Isoprenyl pyrophosphate synthase]]
[[Category: Prenyltransferase]]
[[Category: Transferase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 25 13:38:27 2010''

Latest revision as of 08:30, 20 March 2024

Mint heterotetrameric geranyl pyrophosphate synthase in complex with magnesium, IPP, and DMASPP (I)

3krf, resolution 2.20Å

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