3ll3: Difference between revisions

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{{Seed}}
[[Image:3ll3.jpg|left|200px]]


<!--
==The crystal structure of ligand bound xylulose kinase from Lactobacillus acidophilus==
The line below this paragraph, containing "STRUCTURE_3ll3", creates the "Structure Box" on the page.
<StructureSection load='3ll3' size='340' side='right'caption='[[3ll3]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ll3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_acidophilus Lactobacillus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LL3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LL3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.002&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=DXP:1-DEOXY-D-XYLULOSE-5-PHOSPHATE'>DXP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=XUL:D-XYLULOSE'>XUL</scene></td></tr>
{{STRUCTURE_3ll3|  PDB=3ll3  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ll3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ll3 OCA], [https://pdbe.org/3ll3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ll3 RCSB], [https://www.ebi.ac.uk/pdbsum/3ll3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ll3 ProSAT]</span></td></tr>
 
</table>
===The crystal structure of ligand bound xylulose kinase from Lactobacillus acidophilus===
== Function ==
 
[https://www.uniprot.org/uniprot/Q5FM28_LACAC Q5FM28_LACAC]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3LL3 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Lactobacillus_acidophilus Lactobacillus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LL3 OCA].  
Check<jmol>
[[Category: Gluconokinase]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ll/3ll3_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ll3 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Lactobacillus acidophilus]]
[[Category: Lactobacillus acidophilus]]
[[Category: Burley, S K.]]
[[Category: Large Structures]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Burley SK]]
[[Category: Swaminathan, S.]]
[[Category: Swaminathan S]]
[[Category: Zhang, Z.]]
[[Category: Zhang Z]]
[[Category: 11120e1]]
[[Category: Adp]]
[[Category: Atp]]
[[Category: Kinase]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nysgx]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Transferase]]
[[Category: Xylulose]]
[[Category: Xylulose kinase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 24 09:05:36 2010''
Retrieved from "https://proteopedia.org/3ll3"