Group:SMART:2010 Pingry SMART Team Models: Difference between revisions

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'''Return to 2010 SMART Team Page:''' [[2010 Pingry SMART Team]]
<StructureSection load='AdhD_with_three_cofactors_no_H.pdb' size='450' side='right' scene='2010_Pingry_SMART_Team/Adhd_final_default/2' caption=''>
'''Return to 2010 SMART Team Page:''' [[Group:SMART:2010 Pingry SMART Team | 2010 Pingry SMART Team]]
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== AdhD K249G/H255R double mutant ==
== AdhD K249G/H255R double mutant ==
<applet load='AdhD_with_three_cofactors_no_H.pdb' size='500' frame='true' align='right' caption='AdhD K249G/H255R double mutant' scene='2010_Pingry_SMART_Team/Adhd_final_default/2'/>


'''Design description'''
'''Design description'''
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Residues involved in cofactor binding and commonly seen in AKR's have sidechains highlighted: S251, N252, and H255R.  
Residues involved in cofactor binding and commonly seen in AKR's have sidechains highlighted: S251, N252, and H255R.  
Amino terminus colored dark blue: [0,0,128]
Carboxyl terminus colored cherry: [128,0,0]


<scene name='2010_Pingry_SMART_Team/Adhd_final_default_nad/2'>Show NAD</scene>
<scene name='2010_Pingry_SMART_Team/Adhd_final_default_nad/2'>Show NAD</scene>
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==PDB ID: [[1m9h]], Mutant 2,5-diketo-d-gluconic acid reductase with NADH (mutant)==
==PDB ID: 1m9h, Mutant 2,5-diketo-d-gluconic acid reductase with NADH (mutant)==
<scene name='2010_Pingry_SMART_Team_Models/1m9h_final/3'>Mutant 2,5-diketo-d-gluconic acid reductase with NADH</scene>
 
<applet load='1m9h' size='500' frame='true' align='right' caption='1m9h, Mutant 2,5-diketo-d-gluconic acid reductase with NADH' scene='2010_Pingry_SMART_Team_Models/1m9h_final/3'/>


'''Design description'''
'''Design description'''
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==PDB ID: [[1mi3]], Xylose reductase with NAD+==
<scene name='2010_Pingry_SMART_Team_Models/1mi3_final/7'>Xylose reductase with NAD+</scene>


==PDB ID: 1mi3, Xylose reductase with NAD+==
<applet load='1MI3_chainA.pdb' size='500' frame='true' align='right' caption='1mi3, Xylose reductase with NAD+' scene='2010_Pingry_SMART_Team_Models/1mi3_final/7'/>


'''Design description'''
'''Design description'''
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==PDB ID: 1afs, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with cofactor and testosterone==
==PDB ID: [[1afs]], Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with cofactor and testosterone==
 
<scene name='2010_Pingry_SMART_Team_Models/1afs_final2/1'>Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with cofactor and testosterone</scene>
<applet load='1AFS_chainA.pdb' size='500' frame='true' align='right' caption='1afs, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with cofactor and testosterone' scene='2010_Pingry_SMART_Team_Models/1afs_final2/1'/>
 
'''Model description'''
'''Model description'''