3m5k: Difference between revisions

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{{Seed}}
[[Image:3m5k.jpg|left|200px]]


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==Crystal structure of Putative NADH dehydrogenase/NAD(P)H nitroreductase (BDI_1728) from Parabacteroides distasonis ATCC 8503 at 1.86 A resolution==
The line below this paragraph, containing "STRUCTURE_3m5k", creates the "Structure Box" on the page.
<StructureSection load='3m5k' size='340' side='right'caption='[[3m5k]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3m5k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Parabacteroides_distasonis_ATCC_8503 Parabacteroides distasonis ATCC 8503]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M5K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3M5K FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3m5k|  PDB=3m5k  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3m5k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m5k OCA], [https://pdbe.org/3m5k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3m5k RCSB], [https://www.ebi.ac.uk/pdbsum/3m5k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3m5k ProSAT]</span></td></tr>
 
</table>
===Crystal structure of Putative NADH dehydrogenase/NAD(P)H nitroreductase (BDI_1728) from Parabacteroides distasonis ATCC 8503 at 1.86 A resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/A6LCR1_PARD8 A6LCR1_PARD8]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3M5K is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Parabacteroides_distasonis Parabacteroides distasonis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M5K OCA].  
Check<jmol>
[[Category: Parabacteroides distasonis]]
  <jmolCheckbox>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m5/3m5k_consurf.spt"</scriptWhenChecked>
[[Category: Jcsg]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Joint center for structural genomic]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Oxidoreductase]]
  </jmolCheckbox>
[[Category: Protein structure initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3m5k ConSurf].
[[Category: Psi-2]]
<div style="clear:both"></div>
[[Category: Structural genomic]]
__TOC__
 
</StructureSection>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May  5 12:11:05 2010''
[[Category: Large Structures]]
[[Category: Parabacteroides distasonis ATCC 8503]]
Retrieved from "https://proteopedia.org/3m5k"