3msr: Difference between revisions

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==The crystal structure of an amidohydrolase from Mycoplasma synoviae==
The line below this paragraph, containing "STRUCTURE_3msr", creates the "Structure Box" on the page.
<StructureSection load='3msr' size='340' side='right'caption='[[3msr]], [[Resolution|resolution]] 2.16&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3msr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycoplasmopsis_synoviae_53 Mycoplasmopsis synoviae 53]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MSR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MSR FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.162&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_3msr|  PDB=3msr  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3msr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3msr OCA], [https://pdbe.org/3msr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3msr RCSB], [https://www.ebi.ac.uk/pdbsum/3msr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3msr ProSAT]</span></td></tr>
 
</table>
===The crystal structure of an amidohydrolase from Mycoplasma synoviae===
== Function ==
 
[https://www.uniprot.org/uniprot/PFLAC_MYCS5 PFLAC_MYCS5] Catalyzes the hydrolysis of D-xylono-1,4-lactone-5-phosphate and L-arabino-1,4-lactone-5-phosphate. Also able to hydrolyze carboxy 1,4-lactones.<ref>PMID:24955762</ref>
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3MSR is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycoplasma_synoviae Mycoplasma synoviae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MSR OCA].  
Check<jmol>
[[Category: Mycoplasma synoviae]]
  <jmolCheckbox>
[[Category: Burley, S K.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ms/3msr_consurf.spt"</scriptWhenChecked>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Swaminathan, S.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Zhang, Z.]]
  </jmolCheckbox>
[[Category: Amidohydrolase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3msr ConSurf].
[[Category: Had]]
<div style="clear:both"></div>
[[Category: Hydrolase]]
== References ==
[[Category: New york sgx research center for structural genomic]]
<references/>
[[Category: Nysgxrc]]
__TOC__
[[Category: Protein structure initiative]]
</StructureSection>
[[Category: Psi]]
[[Category: Large Structures]]
[[Category: Sgx]]
[[Category: Mycoplasmopsis synoviae 53]]
[[Category: Structural genomic]]
[[Category: Burley SK]]
 
[[Category: Swaminathan S]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 12 11:26:58 2010''
[[Category: Zhang Z]]

Latest revision as of 06:30, 27 November 2024

The crystal structure of an amidohydrolase from Mycoplasma synoviae

3msr, resolution 2.16Å

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