3n3d: Difference between revisions

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{{Seed}}
[[Image:3n3d.jpg|left|200px]]


<!--
==Crystal structure of geranylgeranyl pyrophosphate synthase from lactobacillus brevis atcc 367==
The line below this paragraph, containing "STRUCTURE_3n3d", creates the "Structure Box" on the page.
<StructureSection load='3n3d' size='340' side='right'caption='[[3n3d]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3n3d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Levilactobacillus_brevis_ATCC_367 Levilactobacillus brevis ATCC 367]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N3D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N3D FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3n3d|  PDB=3n3d |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n3d OCA], [https://pdbe.org/3n3d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n3d RCSB], [https://www.ebi.ac.uk/pdbsum/3n3d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n3d ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q03Q08_LEVBA Q03Q08_LEVBA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n3/3n3d_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3n3d ConSurf].
<div style="clear:both"></div>


===Crystal structure of geranylgeranyl pyrophosphate synthase from lactobacillus brevis atcc 367===
==See Also==
 
*[[Geranylgeranyl pyrophosphate synthase 3D structures|Geranylgeranyl pyrophosphate synthase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3N3D is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Lactobacillus_brevis Lactobacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N3D OCA].
[[Category: Large Structures]]
[[Category: Lactobacillus brevis]]
[[Category: Levilactobacillus brevis ATCC 367]]
[[Category: Almo, S C.]]
[[Category: Almo SC]]
[[Category: Burley, S K.]]
[[Category: Burley SK]]
[[Category: Chang, S.]]
[[Category: Chang S]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Patskovsky Y]]
[[Category: Nysgxrc, New York Structural Genomix Research Consortium.]]
[[Category: Rutter M]]
[[Category: Patskovsky, Y.]]
[[Category: Sauder JM]]
[[Category: Rutter, M.]]
[[Category: Toro R]]
[[Category: Sauder, J M.]]
[[Category: Toro, R.]]
[[Category: Isoprenyl diphosphate synthase]]
[[Category: New york sgx research center for structural genomic]]
[[Category: New york structural genomix research consortium]]
[[Category: Nysgrc]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: Transferase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun  2 08:41:14 2010''
Retrieved from "https://proteopedia.org/3n3d"