3loc: Difference between revisions

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{{Seed}}
[[Image:3loc.png|left|200px]]


<!--
==Crystal structure of putative transcriptional regulator ycdc==
The line below this paragraph, containing "STRUCTURE_3loc", creates the "Structure Box" on the page.
<StructureSection load='3loc' size='340' side='right'caption='[[3loc]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1pb6 1pb6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LOC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LOC FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3loc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3loc OCA], [https://pdbe.org/3loc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3loc RCSB], [https://www.ebi.ac.uk/pdbsum/3loc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3loc ProSAT]</span></td></tr>
-->
</table>
{{STRUCTURE_3loc|  PDB=3loc  |  SCENE=  }}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
===Crystal structure of putative transcriptional regulator ycdc===
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lo/3loc_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
3LOC is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1pb6 1pb6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LOC OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Escherichia coli]]
  </jmolCheckbox>
[[Category: Almo, S C.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3loc ConSurf].
[[Category: Burley, S K.]]
<div style="clear:both"></div>
[[Category: Knapik, A A.]]
__TOC__
[[Category: Mennella, V.]]
</StructureSection>
[[Category: Minor, W.]]
[[Category: Large Structures]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Almo SC]]
[[Category: Patskovsky, Y V.]]
[[Category: Burley SK]]
[[Category: Dimer]]
[[Category: Knapik AA]]
[[Category: Dna-binding]]
[[Category: Mennella V]]
[[Category: Helix-turn-helix]]
[[Category: Minor W]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Patskovsky YV]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Putative transcriptional regulator]]
[[Category: Repressor]]
[[Category: Structural genomic]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Uracil]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 16 08:17:45 2010''

Latest revision as of 09:56, 13 April 2022

Crystal structure of putative transcriptional regulator ycdc

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