3m95: Difference between revisions
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< | ==Crystal structure of autophagy-related protein Atg8 from the silkworm Bombyx mori== | ||
<StructureSection load='3m95' size='340' side='right'caption='[[3m95]], [[Resolution|resolution]] 2.40Å' scene=''> | |||
You may | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3m95]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M95 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3M95 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> | |||
-- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3m95 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m95 OCA], [https://pdbe.org/3m95 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3m95 RCSB], [https://www.ebi.ac.uk/pdbsum/3m95 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3m95 ProSAT]</span></td></tr> | ||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q2F5R5_BOMMO Q2F5R5_BOMMO] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m9/3m95_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3m95 ConSurf]. | |||
<div style="clear:both"></div> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Autophagy-related protein Atg8 is ubiquitous in all eukaryotes. It is involved in the Atg8-PE ubiquitin-like conjugation system, which is essential for autophagosome formation. The structures of Atg8 from different species are very similar and share a ubiquitin-fold domain at the C-terminus. In the 2.40 A crystal structure of Atg8 from the silkworm Bombyx mori reported here, the ubiquitin fold at the C-terminus is preceded by two additional helices at the N-terminus. | |||
Structure of autophagy-related protein Atg8 from the silkworm Bombyx mori.,Hu C, Zhang X, Teng YB, Hu HX, Li WF Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jul 1;66(Pt, 7):787-90. Epub 2010 Jun 23. PMID:20606273<ref>PMID:20606273</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
<div class="pdbe-citations 3m95" style="background-color:#fffaf0;"></div> | |||
==See Also== | |||
*[[Autophagy-related protein 3D structures|Autophagy-related protein 3D structures]] | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
== | |||
== | |||
< | |||
[[Category: Bombyx mori]] | [[Category: Bombyx mori]] | ||
[[Category: Hu | [[Category: Large Structures]] | ||
[[Category: Hu | [[Category: Hu C]] | ||
[[Category: Jiang | [[Category: Hu H-X]] | ||
[[Category: Teng | [[Category: Jiang YL]] | ||
[[Category: Zhang | [[Category: Teng Y-B]] | ||
[[Category: Zhou | [[Category: Zhang X]] | ||
[[Category: Zhou CZ]] | |||
