3iel: Difference between revisions

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{{Seed}}
[[Image:3iel.jpg|left|200px]]


<!--
==Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with UMP==
The line below this paragraph, containing "STRUCTURE_3iel", creates the "Structure Box" on the page.
<StructureSection load='3iel' size='340' side='right'caption='[[3iel]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3iel]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IEL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IEL FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=U5P:URIDINE-5-MONOPHOSPHATE'>U5P</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3iel| PDB=3iel |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iel FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iel OCA], [https://pdbe.org/3iel PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iel RCSB], [https://www.ebi.ac.uk/pdbsum/3iel PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iel ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RNSE_THET8 RNSE_THET8] Has endoribonuclease activity towards 23S and 16S rRNA (in vitro).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ie/3iel_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iel ConSurf].
<div style="clear:both"></div>


===Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with UMP===
==See Also==
 
*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3IEL is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IEL OCA].
[[Category: Large Structures]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus HB8]]
[[Category: Ishikawa, H.]]
[[Category: Ishikawa H]]
[[Category: Kuramitsu, S.]]
[[Category: Kuramitsu S]]
[[Category: Masui, R.]]
[[Category: Masui R]]
[[Category: Nakagawa, N.]]
[[Category: Nakagawa N]]
[[Category: Yokoyama, S.]]
[[Category: Yokoyama S]]
[[Category: Endonuclease]]
[[Category: Hydrolase]]
[[Category: Metal-binding]]
[[Category: Metallo beta lactamase fold]]
[[Category: Nuclease]]
[[Category: Rna-binding]]
[[Category: Rrna processing]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 28 12:36:03 2010''
Retrieved from "https://proteopedia.org/3iel"