3ntx: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3ntx.jpg|left|200px]]


<!--
==Crystal Structure of L-asparaginase I from Yersinia pestis==
The line below this paragraph, containing "STRUCTURE_3ntx", creates the "Structure Box" on the page.
<StructureSection load='3ntx' size='340' side='right'caption='[[3ntx]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ntx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_CO92 Yersinia pestis CO92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NTX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NTX FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3ntx|  PDB=3ntx |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ntx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ntx OCA], [https://pdbe.org/3ntx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ntx RCSB], [https://www.ebi.ac.uk/pdbsum/3ntx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ntx ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A3N4B0Q2_YERPE A0A3N4B0Q2_YERPE]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nt/3ntx_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ntx ConSurf].
<div style="clear:both"></div>


===Crystal Structure of L-asparaginase I from Yersinia pestis===
==See Also==
 
*[[Asparaginase 3D structures|Asparaginase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3NTX is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NTX OCA].
[[Category: Large Structures]]
[[Category: Asparaginase]]
[[Category: Yersinia pestis CO92]]
[[Category: Yersinia pestis]]
[[Category: Anderson WF]]
[[Category: Anderson, W F.]]
[[Category: Gu M]]
[[Category: Gu, M.]]
[[Category: Hasseman J]]
[[Category: Hasseman, J.]]
[[Category: Joachimiak A]]
[[Category: Joachimiak, A.]]
[[Category: Kim Y]]
[[Category: Kim, Y.]]
[[Category: Alpha-beta-alpha sandwich]]
[[Category: Center for structural genomics of infectious disease]]
[[Category: Csgid]]
[[Category: Hydrolase]]
[[Category: Structural genomic]]
[[Category: Structural genomics of infectious disease]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug  4 09:13:41 2010''
Retrieved from "https://proteopedia.org/3ntx"