3nk5: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3nk5.jpg|left|200px]]


<!--
==Crystal structure of AqpZ mutant F43W==
The line below this paragraph, containing "STRUCTURE_3nk5", creates the "Structure Box" on the page.
<StructureSection load='3nk5' size='340' side='right'caption='[[3nk5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3nk5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NK5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NK5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr>
{{STRUCTURE_3nk5| PDB=3nk5 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nk5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nk5 OCA], [https://pdbe.org/3nk5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nk5 RCSB], [https://www.ebi.ac.uk/pdbsum/3nk5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nk5 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/AQPZ_ECOLI AQPZ_ECOLI] Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity.<ref>PMID:10400575</ref> <ref>PMID:10518952</ref> <ref>PMID:11493683</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nk/3nk5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nk5 ConSurf].
<div style="clear:both"></div>


===Crystal structure of AqpZ mutant F43W===
==See Also==
 
*[[Aquaporin 3D structures|Aquaporin 3D structures]]
 
== References ==
==About this Structure==
<references/>
3NK5 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NK5 OCA].
__TOC__
[[Category: Escherichia coli]]
</StructureSection>
[[Category: Connell, J DO.]]
[[Category: Escherichia coli K-12]]
[[Category: Finer-Moore, J S.]]
[[Category: Large Structures]]
[[Category: Savage, D F.]]
[[Category: Finer-Moore JS]]
[[Category: Stroud, R M.]]
[[Category: O'Connell JD]]
[[Category: Aquaporin]]
[[Category: Savage DF]]
[[Category: Integral membrane protein]]
[[Category: Stroud RM]]
[[Category: Selectivity filter]]
[[Category: Transport protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 11 23:59:30 2010''

Latest revision as of 10:30, 21 February 2024

Crystal structure of AqpZ mutant F43W

3nk5, resolution 2.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA