3oaj: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3oaj.jpg|left|200px]]


<!--
==CRYSTAL STRUCTURE OF putative dioxygenase from Bacillus subtilis subsp. subtilis str. 168==
The line below this paragraph, containing "STRUCTURE_3oaj", creates the "Structure Box" on the page.
<StructureSection load='3oaj' size='340' side='right'caption='[[3oaj]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3oaj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OAJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OAJ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3oaj|  PDB=3oaj  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oaj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oaj OCA], [https://pdbe.org/3oaj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oaj RCSB], [https://www.ebi.ac.uk/pdbsum/3oaj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oaj ProSAT]</span></td></tr>
 
</table>
===CRYSTAL STRUCTURE OF putative dioxygenase from Bacillus subtilis subsp. subtilis str. 168===
== Function ==
 
[https://www.uniprot.org/uniprot/MHQO_BACSU MHQO_BACSU] Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds (Potential).
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3OAJ is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis Bacillus subtilis subsp. subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OAJ OCA].  
Check<jmol>
[[Category: Bacillus subtilis subsp. subtilis]]
  <jmolCheckbox>
[[Category: Almo, S C.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oa/3oaj_consurf.spt"</scriptWhenChecked>
[[Category: Foti, R.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Garrett, S.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Malashkevich, V N.]]
  </jmolCheckbox>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3oaj ConSurf].
[[Category: Seidel, R.]]
<div style="clear:both"></div>
[[Category: Toro, R.]]
__TOC__
[[Category: New york sgx research center for structural genomic]]
</StructureSection>
[[Category: Nysgxrc]]
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Protein structure initiative]]
[[Category: Large Structures]]
[[Category: Psi-2]]
[[Category: Almo SC]]
[[Category: Structural genomic]]
[[Category: Foti R]]
[[Category: Unknown function]]
[[Category: Garrett S]]
 
[[Category: Malashkevich VN]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 18 11:52:18 2010''
[[Category: Seidel R]]
[[Category: Toro R]]

Latest revision as of 09:32, 6 September 2023

CRYSTAL STRUCTURE OF putative dioxygenase from Bacillus subtilis subsp. subtilis str. 168

3oaj, resolution 1.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=3oaj&oldid=3868808"