3io5: Difference between revisions

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{{Seed}}
[[Image:3io5.jpg|left|200px]]


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==Crystal Structure of a dimeric form of the uvsX Recombinase core domain from Enterobacteria Phage T4==
The line below this paragraph, containing "STRUCTURE_3io5", creates the "Structure Box" on the page.
<StructureSection load='3io5' size='340' side='right'caption='[[3io5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3io5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IO5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_3io5|  PDB=3io5  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3io5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3io5 OCA], [https://pdbe.org/3io5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3io5 RCSB], [https://www.ebi.ac.uk/pdbsum/3io5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3io5 ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of a dimeric form of the uvsX Recombinase core domain from Enterobacteria Phage T4===
== Function ==
 
[https://www.uniprot.org/uniprot/UVSX_BPT4 UVSX_BPT4] Important in genetic recombination, DNA repair, and replication. Possesses pairing and strand-transfer activity. Interacts with dda and gene 32 proteins.
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3IO5 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IO5 OCA].  
Check<jmol>
[[Category: Enterobacteria phage t4]]
  <jmolCheckbox>
[[Category: Gajewski, S.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/io/3io5_consurf.spt"</scriptWhenChecked>
[[Category: Atp-binding]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Dna binding protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Dna damage]]
  </jmolCheckbox>
[[Category: Dna recombination]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3io5 ConSurf].
[[Category: Dna repair]]
<div style="clear:both"></div>
[[Category: Dna replication]]
__TOC__
[[Category: Inactive conformation]]
</StructureSection>
[[Category: Nucleotide-binding]]
[[Category: Escherichia virus T4]]
[[Category: Reca like core domain]]
[[Category: Large Structures]]
[[Category: Storage dimer]]
[[Category: Gajewski S]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 25 08:54:51 2010''
Retrieved from "https://proteopedia.org/3io5"