3of3: Difference between revisions

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{{Seed}}
[[Image:3of3.jpg|left|200px]]


<!--
==Crystal structure of PNP with an inhibitor DADME_immH from Vibrio cholerae==
The line below this paragraph, containing "STRUCTURE_3of3", creates the "Structure Box" on the page.
<StructureSection load='3of3' size='340' side='right'caption='[[3of3]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3of3]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OF3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OF3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIH:3-HYDROXY-4-HYDROXYMETHYL-1-(4-OXO-4,4A,5,7A-TETRAHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YLMETHYL)-PYRROLIDINIUM'>DIH</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_3of3| PDB=3of3 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3of3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3of3 OCA], [https://pdbe.org/3of3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3of3 RCSB], [https://www.ebi.ac.uk/pdbsum/3of3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3of3 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/DEOD1_VIBCH DEOD1_VIBCH]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/of/3of3_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3of3 ConSurf].
<div style="clear:both"></div>


===Crystal structure of PNP with an inhibitor DADME_immH from Vibrio cholerae===
==See Also==
 
*[[Purine nucleoside phosphorylase 3D structures|Purine nucleoside phosphorylase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3OF3 is a 12 chains structure with sequences from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OF3 OCA].
[[Category: Large Structures]]
[[Category: Purine-nucleoside phosphorylase]]
[[Category: Vibrio cholerae]]
[[Category: Vibrio cholerae]]
[[Category: Almo, S C.]]
[[Category: Almo SC]]
[[Category: Burley, S K.]]
[[Category: Burley SK]]
[[Category: Kim, J.]]
[[Category: Kim J]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Ramagopal UA]]
[[Category: Ramagopal, U A.]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nysgxrc]]
[[Category: Phophoryl transferase]]
[[Category: Phosphate]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Purine nucleoside]]
[[Category: Structural genomic]]
[[Category: Transferase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep  1 09:51:08 2010''
Retrieved from "https://proteopedia.org/3of3"