3oj0: Difference between revisions
From Proteopedia
Jump to navigationJump to search
New page: {{Seed}} left|200px <!-- The line below this paragraph, containing "STRUCTURE_3oj0", creates the "Structure Box" on the page. You may change the PDB parameter (which se... |
No edit summary |
||
| (5 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
==Crystal structure of glutamyl-tRNA reductase from Thermoplasma volcanium (nucleotide binding domain)== | |||
<StructureSection load='3oj0' size='340' side='right'caption='[[3oj0]], [[Resolution|resolution]] 1.65Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3oj0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_volcanium_GSS1 Thermoplasma volcanium GSS1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OJ0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OJ0 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.648Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oj0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oj0 OCA], [https://pdbe.org/3oj0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oj0 RCSB], [https://www.ebi.ac.uk/pdbsum/3oj0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oj0 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/HEM1_THEVO HEM1_THEVO] Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA) (By similarity). | |||
== Evolutionary Conservation == | |||
== | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | |||
[[ | <jmolCheckbox> | ||
[[ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oj/3oj0_consurf.spt"</scriptWhenChecked> | ||
[[ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
[[ | <text>to colour the structure by Evolutionary Conservation</text> | ||
[ | </jmolCheckbox> | ||
[[ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3oj0 ConSurf]. | ||
[ | <div style="clear:both"></div> | ||
[ | __TOC__ | ||
[[Category: | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Thermoplasma volcanium GSS1]] | ||
[[Category: | [[Category: Clancy S]] | ||
[[Category: | [[Category: Joachimiak A]] | ||
[[Category: | [[Category: Marshall N]] | ||
[[Category: | [[Category: Michalska K]] | ||
[[Category: Puttagunta R]] | |||
Latest revision as of 09:30, 30 October 2024
Crystal structure of glutamyl-tRNA reductase from Thermoplasma volcanium (nucleotide binding domain)
| ||||||||||||
