3nrt: Difference between revisions

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{{Seed}}
[[Image:3nrt.jpg|left|200px]]


<!--
==The crystal structure of putative ryanodine receptor from Bacteroides thetaiotaomicron VPI-5482==
The line below this paragraph, containing "STRUCTURE_3nrt", creates the "Structure Box" on the page.
<StructureSection load='3nrt' size='340' side='right'caption='[[3nrt]], [[Resolution|resolution]] 2.54&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3nrt]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_VPI-5482 Bacteroides thetaiotaomicron VPI-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NRT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NRT FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.54&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3nrt|  PDB=3nrt  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nrt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nrt OCA], [https://pdbe.org/3nrt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nrt RCSB], [https://www.ebi.ac.uk/pdbsum/3nrt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nrt ProSAT]</span></td></tr>
 
</table>
===The crystal strucutre of putative ryanodine receptor from Bacteroides thetaiotaomicron VPI-5482===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8A5J2_BACTN Q8A5J2_BACTN]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3NRT is a 6 chains structure with sequences from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NRT OCA].  
Check<jmol>
[[Category: Bacteroides thetaiotaomicron]]
  <jmolCheckbox>
[[Category: James, A.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nr/3nrt_consurf.spt"</scriptWhenChecked>
[[Category: Joachimiak, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Wu, R.]]
  </jmolCheckbox>
[[Category: Zhang, R.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nrt ConSurf].
[[Category: Protein structure initiative]]
<div style="clear:both"></div>
[[Category: Psi-2]]
__TOC__
[[Category: Structural genomic]]
</StructureSection>
[[Category: Unknown function]]
[[Category: Bacteroides thetaiotaomicron VPI-5482]]
 
[[Category: Large Structures]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 15 10:52:06 2010''
[[Category: James A]]
[[Category: Joachimiak A]]
[[Category: Wu R]]
[[Category: Zhang R]]

Latest revision as of 10:14, 6 November 2024

The crystal structure of putative ryanodine receptor from Bacteroides thetaiotaomicron VPI-5482

3nrt, resolution 2.54Å

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