3o2g: Difference between revisions

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{{Seed}}
[[Image:3o2g.jpg|left|200px]]


<!--
==Crystal Structure of Human gamma-butyrobetaine,2-oxoglutarate dioxygenase 1 (BBOX1)==
The line below this paragraph, containing "STRUCTURE_3o2g", creates the "Structure Box" on the page.
<StructureSection load='3o2g' size='340' side='right'caption='[[3o2g]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3o2g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O2G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3O2G FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NM2:3-CARBOXY-N,N,N-TRIMETHYLPROPAN-1-AMINIUM'>NM2</scene>, <scene name='pdbligand=OGA:N-OXALYLGLYCINE'>OGA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3o2g| PDB=3o2g |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3o2g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o2g OCA], [https://pdbe.org/3o2g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3o2g RCSB], [https://www.ebi.ac.uk/pdbsum/3o2g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3o2g ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/BODG_HUMAN BODG_HUMAN] Catalyzes the formation of L-carnitine from gamma-butyrobetaine.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o2/3o2g_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3o2g ConSurf].
<div style="clear:both"></div>


===Crystal Structure of Human gamma-butyrobetaine,2-oxoglutarate dioxygenase 1 (BBOX1)===
==See Also==
 
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3O2G is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O2G OCA].
[[Category: Gamma-butyrobetaine dioxygenase]]
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Arrowsmith, C H.]]
[[Category: Large Structures]]
[[Category: Bountra, C.]]
[[Category: Arrowsmith CH]]
[[Category: Claridge, T D.W.]]
[[Category: Bountra C]]
[[Category: Delft, F von.]]
[[Category: Claridge TDW]]
[[Category: Edwards, A.]]
[[Category: Edwards A]]
[[Category: Filippakopoulos, P.]]
[[Category: Filippakopoulos P]]
[[Category: Henry, L.]]
[[Category: Henry L]]
[[Category: Kavanagh, K L.]]
[[Category: Kavanagh KL]]
[[Category: Kochan, G.]]
[[Category: Kochan G]]
[[Category: Krojer, T.]]
[[Category: Krojer T]]
[[Category: Leung, I K.H.]]
[[Category: Leung IKH]]
[[Category: McDonough, M A.]]
[[Category: McDonough MA]]
[[Category: Muniz, J.]]
[[Category: Muniz J]]
[[Category: Oppermann, U.]]
[[Category: Oppermann U]]
[[Category: Pilka, E.]]
[[Category: Pilka E]]
[[Category: SGC, Structural Genomics Consortium.]]
[[Category: Schofield CJ]]
[[Category: Schofield, C J.]]
[[Category: Ugochukwu E]]
[[Category: Ugochukwu, E.]]
[[Category: Weigelt J]]
[[Category: Weigelt, J.]]
[[Category: Von Delft F]]
[[Category: 2-oxoglutarate dioxygenase 1]]
[[Category: Gamma-butyrobetaine]]
[[Category: Gamma-butyrobetaine hydroxylase]]
[[Category: Oxidoreductase]]
[[Category: Sgc]]
[[Category: Structural genomic]]
[[Category: Structural genomics consortium]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 15 10:53:40 2010''

Latest revision as of 10:32, 21 February 2024

Crystal Structure of Human gamma-butyrobetaine,2-oxoglutarate dioxygenase 1 (BBOX1)

3o2g, resolution 1.78Å

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