3ops: Difference between revisions

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==Crystal structure of mandelate racemase/muconate lactonizing protein FROM GEOBACILLUS SP. Y412MC10 complexed with magnesium/tartrate==
The line below this paragraph, containing "STRUCTURE_3ops", creates the "Structure Box" on the page.
<StructureSection load='3ops' size='340' side='right'caption='[[3ops]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ops]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Paenibacillus_sp._Y412MC10 Paenibacillus sp. Y412MC10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OPS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OPS FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=TAR:D(-)-TARTARIC+ACID'>TAR</scene></td></tr>
{{STRUCTURE_3ops| PDB=3ops |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ops FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ops OCA], [https://pdbe.org/3ops PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ops RCSB], [https://www.ebi.ac.uk/pdbsum/3ops PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ops ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/D3EID5_GEOS4 D3EID5_GEOS4]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/op/3ops_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ops ConSurf].
<div style="clear:both"></div>


===Crystal structure of mandelate racemase/muconate lactonizing protein TITLE 2 FROM GEOBACILLUS SP. Y412MC10 complexed with magnesium/tartrate===
==See Also==
 
*[[Mandelate racemase|Mandelate racemase]]
 
*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
==About this Structure==
__TOC__
3OPS is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Geobacillus_sp._y412mc10 Geobacillus sp. y412mc10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OPS OCA].
</StructureSection>
[[Category: Geobacillus sp. y412mc10]]
[[Category: Large Structures]]
[[Category: Almo, S C.]]
[[Category: Paenibacillus sp. Y412MC10]]
[[Category: Burley, S K.]]
[[Category: Almo SC]]
[[Category: Malashkevich, V N.]]
[[Category: Burley SK]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Malashkevich VN]]
[[Category: Patskovsky, Y.]]
[[Category: Patskovsky Y]]
[[Category: Ramagopal, U.]]
[[Category: Ramagopal U]]
[[Category: Sauder, J M.]]
[[Category: Sauder JM]]
[[Category: Toro, R.]]
[[Category: Toro R]]
[[Category: Crystal structure]]
[[Category: Isomerase]]
[[Category: New york sgx research center for structural genomic]]
[[Category: New york structural genomix research consortium]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Racemase]]
[[Category: Structural genomic]]
 
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Retrieved from "https://proteopedia.org/3ops"