Fibrin: Difference between revisions

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New page: left|200px|thumb|Crystal Structure of Human Fibrin, [[1n8e]] {{STRUCTURE_1n8e| PDB=1n8e | SIZE=300| SCENE= |right|CAPTION=Human Fibrin, 1n8e }}
 
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[[Image:1n8e.png|left|200px|thumb|Crystal Structure of Human Fibrin, [[1n8e]]]]
<StructureSection load='1n73' size='350' side='right' scene='41/417472/Cv/3' caption='Fibrin α1 subunit (red, yellow), β subunit (cyan, blue), γ subunit (orange, magenta) from Petromyzon marinus (PDB entry [[1n73]])'>
{{STRUCTURE_1n8e|  PDB=1n8e  | SIZE=300| SCENE= |right|CAPTION=Human Fibrin, [[1n8e]] }}
 
== Function ==
 
[[Fibrin]] (or Factor Ia, FIa) is a fibrous protein which when polymerized is involved in blood clotting. The polymerization epitopes of FIa are called A-knob and B-knob.  [[Fibrinogen]] (Factor I, FI) is converted by thrombin to fibrin.  Limited proteolysis of FI results in a fragment named D which when cross-linked by factor XIII is called double-D FIa (DDFIa)<ref>PMID:12501189</ref>.
 
== Disease ==
 
Overexpression of FIa can cause thrombosis.
 
== Structural highlights ==
 
<scene name='41/417472/Cv/6'>Ca coordination site in β subunit</scene>.
 
<scene name='41/417472/Cv/7'>Ca coordination site in γ subunit</scene> (PDB entry [[1n73]]).  
</StructureSection>
== 3D Structures of Fibrin ==
 
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
 
[[3h32]] – hFIa peptide+ hFI α, β, γ chains – human<br />
[[2q9i]], [[2z4e]] - hFIa B-knob+ hFI α, β, γ chains<br />
[[2hlo]], [[1n86]] - hFIa α, β, γ chains + peptide<br />
[[1n8e]] - hFIa α, β, γ chains <br />
[[2a45]] - hFIa α, β, γ chains + thrombin<br />
[[1fzc]] – hDDFIa+peptide<br />
[[1n73]] - FIa α, β, γ chains + peptide – Sea lamprey<br />
 
== References ==
<references/>
 
[[Category:Topic Page]]

Latest revision as of 07:49, 2 March 2023

Fibrinα1 subunit (red, yellow), β subunit (cyan, blue), γ subunit (orange, magenta) from Petromyzon marinus (PDB entry 1n73)

Drag the structure with the mouse to rotate

3D Structures of Fibrin

Updated on 02-March-2023

Fibrinogen – hFIa peptide+ hFI α, β, γ chains – human
1n73, 2z4e - hFIa B-knob+ hFI α, β, γ chains
2hlo, 1n86 - hFIa α, β, γ chains + peptide
1n8e - hFIa α, β, γ chains
2a45 - hFIa α, β, γ chains + thrombin
1fzc – hDDFIa+peptide
1n73 - FIa α, β, γ chains + peptide – Sea lamprey

References

Proteopedia Page Contributors and Editors (what is this?)

Alexander Berchansky, Michal Harel