3nyi: Difference between revisions

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{{Seed}}
[[Image:3nyi.jpg|left|200px]]


<!--
==The crystal structure of a fat acid (stearic acid)-binding protein from Eubacterium ventriosum ATCC 27560.==
The line below this paragraph, containing "STRUCTURE_3nyi", creates the "Structure Box" on the page.
<StructureSection load='3nyi' size='340' side='right'caption='[[3nyi]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3nyi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Eubacterium_ventriosum_ATCC_27560 Eubacterium ventriosum ATCC 27560]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NYI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NYI FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=STE:STEARIC+ACID'>STE</scene></td></tr>
{{STRUCTURE_3nyi|  PDB=3nyi  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nyi OCA], [https://pdbe.org/3nyi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nyi RCSB], [https://www.ebi.ac.uk/pdbsum/3nyi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nyi ProSAT]</span></td></tr>
 
</table>
===The crystal structure of a fat acid (stearic acid)-binding protein from Eubacterium ventriosum ATCC 27560.===
== Function ==
 
[https://www.uniprot.org/uniprot/A5Z657_9FIRM A5Z657_9FIRM]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3NYI is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Eubacterium_ventriosum Eubacterium ventriosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NYI OCA].  
Check<jmol>
[[Category: Eubacterium ventriosum]]
  <jmolCheckbox>
[[Category: Babnigg, G.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/3nyi_consurf.spt"</scriptWhenChecked>
[[Category: Joachimiak, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Keigher, L.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Li, H.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nyi ConSurf].
[[Category: Tan, K.]]
<div style="clear:both"></div>
[[Category: Zhang, R.]]
__TOC__
[[Category: Degv family protein]]
</StructureSection>
[[Category: Lipid binding protein]]
[[Category: Eubacterium ventriosum ATCC 27560]]
[[Category: Mcsg]]
[[Category: Large Structures]]
[[Category: Midwest center for structural genomic]]
[[Category: Babnigg G]]
[[Category: Protein structure initiative]]
[[Category: Joachimiak A]]
[[Category: Psi-2]]
[[Category: Keigher L]]
[[Category: Stearic acid]]
[[Category: Li H]]
[[Category: Structural genomic]]
[[Category: Tan K]]
 
[[Category: Zhang R]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 22 14:48:17 2010''

Latest revision as of 08:04, 9 October 2024

The crystal structure of a fat acid (stearic acid)-binding protein from Eubacterium ventriosum ATCC 27560.

3nyi, resolution 1.90Å

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