Sandbox Reserved 20: Difference between revisions

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| To get started:
<!-- DO NOT DELETE THE TEMPLATE LINE -->
* Click the ''edit this page'' tab at the top. <font color="red">Save the page after each step, then edit it again.</font>
{{Template:Sandbox Reserved Eric Martz}}
<!-- INSERT YOUR SCENES AND TEXT BELOW THIS LINE -->


* Click the '''3D''' button (when editing, above the wikitext box) to insert Jmol, similar to the one below.
<Structure load='1d66' size='450' frame='true' align='right' caption='Insert caption here' scene='Insert optional scene name here' />
<applet load='1w6l' size='300' frame='true' align='right' caption='Insert caption here' />


* '''show''' the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
Click here to see what can be achieved <scene name='Sandbox_Reserved_20/Copper-centers/1'>TextToBeDisplayed</scene> 


* Add a description of your scene.-Ex. " CotA laccase from ''Bacillus subtilis'' with two '''copper centers'''" -
 
Use the buttons above the wikitext box for''' bold''', ''italics'', [[#|links]], <big><big><b>headlines</b></big></big>, etc.
#The surface of the Gal4 DNA-binding domain that contacts DNA <scene name='Sandbox_Reserved_20/Gal4_charge/2'>has only positive (blue) charges</scene>.
More help: [[Help:Editing]]
#<scene name='Sandbox_Reserved_20/Gal4_conservation2/1'>Lysine 18 is highly conserved</scene> (burgandy color) because it participates in recognizing the CCG sequence of DNA.
|}

Latest revision as of 03:52, 14 May 2013

This Sandbox is Reserved from May 10, 2015, through July 31, 2015 for use by the class Protein 3D Structure Visualization & Structural Bioinformatics taught by Eric Martz and Keiichi Namba at Osaka University, Japan. This reservation includes Sandbox Reserved 1 through Sandbox Reserved 10. Syllabus.
To get started:
  • Click the 'edit this page tab at the top. Save the page after each step, then edit it again.
  • Click the 3D button (when editing, above the wikitext box) to insert Jmol.
  • show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
  • Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.

More help: Getting Started in Proteopedia, Help:Editing, Main Help Page.

Insert caption here

Drag the structure with the mouse to rotate


  1. The surface of the Gal4 DNA-binding domain that contacts DNA has only positive (blue) charges.
  2. Lysine 18 is highly conserved (burgandy color) because it participates in recognizing the CCG sequence of DNA.
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