3mq1: Difference between revisions

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{{Seed}}
[[Image:3mq1.png|left|200px]]


<!--
==Crystal Structure of Dust Mite Allergen Der p 5==
The line below this paragraph, containing "STRUCTURE_3mq1", creates the "Structure Box" on the page.
<StructureSection load='3mq1' size='340' side='right'caption='[[3mq1]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3mq1]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Dermatophagoides_pteronyssinus Dermatophagoides pteronyssinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MQ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MQ1 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_3mq1|  PDB=3mq1  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mq1 OCA], [https://pdbe.org/3mq1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mq1 RCSB], [https://www.ebi.ac.uk/pdbsum/3mq1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mq1 ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of Dust Mite Allergen Der p 5===
== Function ==
 
[https://www.uniprot.org/uniprot/ALL5_DERPT ALL5_DERPT]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_20534590}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 20534590 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mq/3mq1_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_20534590}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3MQ1 is a 6 chains structure with sequences from [http://en.wikipedia.org/wiki/Dermatophagoides_pteronyssinus Dermatophagoides pteronyssinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MQ1 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mq1 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:20534590</ref><references group="xtra"/>
</StructureSection>
[[Category: Dermatophagoides pteronyssinus]]
[[Category: Dermatophagoides pteronyssinus]]
[[Category: Chapman, M D.]]
[[Category: Large Structures]]
[[Category: Cuneo, M J.]]
[[Category: Chapman MD]]
[[Category: Edwards, L L.]]
[[Category: Cuneo MJ]]
[[Category: Glesner, J.]]
[[Category: Edwards LL]]
[[Category: Gosavi, R A.]]
[[Category: Glesner J]]
[[Category: Krahn, J M.]]
[[Category: Gosavi RA]]
[[Category: London, R E.]]
[[Category: Krahn JM]]
[[Category: Mueller, G A.]]
[[Category: London RE]]
[[Category: Pedersen, L C.]]
[[Category: Mueller GA]]
[[Category: Pomes, A.]]
[[Category: Pedersen LC]]
[[Category: Allergen]]
[[Category: Pomes A]]
[[Category: Dust mite]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 24 13:15:31 2010''

Latest revision as of 10:26, 21 February 2024

Crystal Structure of Dust Mite Allergen Der p 5

3mq1, resolution 2.80Å

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