2l5j: Difference between revisions

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{{Seed}}
[[Image:2l5j.jpg|left|200px]]


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==structure of the spliceosomal phosphopeptide P140 (phosphorylated form)==
The line below this paragraph, containing "STRUCTURE_2l5j", creates the "Structure Box" on the page.
<StructureSection load='2l5j' size='340' side='right'caption='[[2l5j]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2l5j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L5J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2L5J FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 8 models</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
{{STRUCTURE_2l5j|  PDB=2l5j  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2l5j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l5j OCA], [https://pdbe.org/2l5j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2l5j RCSB], [https://www.ebi.ac.uk/pdbsum/2l5j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2l5j ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RU17_HUMAN RU17_HUMAN] Mediates the splicing of pre-mRNA by binding to the loop I region of U1-snRNA. The truncated isoforms cannot bind U1-snRNA.
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The phosphopeptide P140 issued from the spliceosomal U1-70K snRNP protein is recognized by lupus CD4(+) T cells, transiently abolishes T cell reactivity to other spliceosomal peptides in P140-treated MRL/lpr mice, and ameliorates their clinical features. P140 modulates lupus patients' T cell response ex vivo and is currently included in phase IIb clinical trials. Its underlying mechanism of action remains elusive. Here we show that P140 peptide binds a unique cell-surface receptor, the constitutively-expressed chaperone HSC70 protein, known as a presenting-protein. P140 induces apoptosis of activated MRL/lpr CD4(+) T cells. In P140-treated mice, it increases peripheral blood lymphocyte apoptosis and decreases B cell, activated T cell, and CD4(-)CD8(-)B220(+) T cell counts via a specific mechanism strictly depending on gammadelta T cells. Expression of inflammation-linked genes is rapidly regulated in CD4(+) T cells. This work led us to identify a powerful pathway taken by a newly-designed therapeutic peptide to immunomodulate lupus autoimmunity.


===structure of the spliceosomal phosphopeptide P140 (phosphorylated form)===
The spliceosomal phosphopeptide P140 controls the lupus disease by interacting with the HSC70 protein and via a mechanism mediated by gammadelta T cells.,Page N, Schall N, Strub JM, Quinternet M, Chaloin O, Decossas M, Cung MT, Van Dorsselaer A, Briand JP, Muller S PLoS One. 2009;4(4):e5273. Epub 2009 Apr 23. PMID:19390596<ref>PMID:19390596</ref>


From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 2l5j" style="background-color:#fffaf0;"></div>


==About this Structure==
==See Also==
2L5J is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L5J OCA].
*[[Nucleoprotein 3D structures|Nucleoprotein 3D structures]]
[[Category: Briand, J.]]
== References ==
[[Category: Chaloin, O.]]
<references/>
[[Category: Cung, M.]]
__TOC__
[[Category: Decossas, M.]]
</StructureSection>
[[Category: Dorsselaer, A van.]]
[[Category: Homo sapiens]]
[[Category: Muller, S.]]
[[Category: Large Structures]]
[[Category: Page, N.]]
[[Category: Briand J]]
[[Category: Quinternet, M.]]
[[Category: Chaloin O]]
[[Category: Schall, N.]]
[[Category: Cung M]]
[[Category: Strub, J.]]
[[Category: Decossas M]]
[[Category: Hsc70]]
[[Category: Muller S]]
[[Category: Lupus]]
[[Category: Page N]]
[[Category: Phosphorylation]]
[[Category: Quinternet M]]
[[Category: Splicing]]
[[Category: Schall N]]
 
[[Category: Strub J]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec  1 11:26:23 2010''
[[Category: Van Dorsselaer A]]

Latest revision as of 09:16, 6 November 2024

structure of the spliceosomal phosphopeptide P140 (phosphorylated form)

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