3bdd: Difference between revisions

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New page: left|200px<br /><applet load="3bdd" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bdd, resolution 2.200Å" /> '''Crystal structure o...
 
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[[Image:3bdd.jpg|left|200px]]<br /><applet load="3bdd" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3bdd, resolution 2.200&Aring;" />
'''Crystal structure of putative multiple antibiotic-resistance repressor (MarR) (ZP_00875883.1) from Streptococcus suis 89/1591 at 2.20 A resolution'''<br />


==About this Structure==
==CRYSTAL STRUCTURE OF A PUTATIVE MULTIPLE ANTIBIOTIC-RESISTANCE REPRESSOR (SSU05_1136) FROM STREPTOCOCCUS SUIS 89/1591 AT 2.20 A RESOLUTION==
3BDD is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria] with <scene name='pdbligand=PO4:'>PO4</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BDD OCA].
<StructureSection load='3bdd' size='340' side='right'caption='[[3bdd]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
[[Category: Bacteria]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[3bdd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_suis_89/1591 Streptococcus suis 89/1591]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BDD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BDD FirstGlance]. <br>
[[Category: JCSG, Joint.Center.for.Structural.Genomics.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
[[Category: GOL]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
[[Category: PO4]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bdd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bdd OCA], [https://pdbe.org/3bdd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bdd RCSB], [https://www.ebi.ac.uk/pdbsum/3bdd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bdd ProSAT], [https://www.topsan.org/Proteins/JCSG/3bdd TOPSAN]</span></td></tr>
[[Category: dna-binding]]
</table>
[[Category: jcsg]]
== Evolutionary Conservation ==
[[Category: joint center for structural genomics]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: protein structure initiative]]
Check<jmol>
[[Category: psi-2]]
  <jmolCheckbox>
[[Category: putative multiple antibiotic-resistance repressor (marr)]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/3bdd_consurf.spt"</scriptWhenChecked>
[[Category: structural genomics]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: transcription]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: transcription regulation]]
  </jmolCheckbox>
[[Category: unknown function]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bdd ConSurf].
[[Category: zp_00875883.1]]
<div style="clear:both"></div>
 
__TOC__
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 11:55:01 2008''
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptococcus suis 89/1591]]
Retrieved from "https://proteopedia.org/3bdd"