3bf4: Difference between revisions

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New page: left|200px<br /><applet load="3bf4" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bf4, resolution 2.100Å" /> '''Crystal structure o...
 
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[[Image:3bf4.jpg|left|200px]]<br /><applet load="3bf4" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3bf4, resolution 2.100&Aring;" />
'''Crystal structure of EthD-like protein (YP_299883.1) from Ralstonia eutropha JMP134 at 2.10 A resolution'''<br />


==About this Structure==
==Crystal structure of an ethd-like protein (reut_b5694) from ralstonia eutropha jmp134 at 2.10 A resolution==
3BF4 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Ralstonia_eutropha_jmp134 Ralstonia eutropha jmp134] with <scene name='pdbligand=EDO:'>EDO</scene> and <scene name='pdbligand=IPA:'>IPA</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BF4 OCA].
<StructureSection load='3bf4' size='340' side='right'caption='[[3bf4]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
[[Category: Ralstonia eutropha jmp134]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[3bf4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_pinatubonensis_JMP134 Cupriavidus pinatubonensis JMP134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BF4 FirstGlance]. <br>
[[Category: JCSG, Joint.Center.for.Structural.Genomics.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
[[Category: EDO]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: IPA]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bf4 OCA], [https://pdbe.org/3bf4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bf4 RCSB], [https://www.ebi.ac.uk/pdbsum/3bf4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bf4 ProSAT], [https://www.topsan.org/Proteins/JCSG/3bf4 TOPSAN]</span></td></tr>
[[Category: ethd-like protein]]
</table>
[[Category: jcsg]]
== Function ==
[[Category: joint center for structural genomics]]
[https://www.uniprot.org/uniprot/Q46P95_CUPPJ Q46P95_CUPPJ]  
[[Category: protein structure initiative]]
== Evolutionary Conservation ==
[[Category: psi-2]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: structural genomics]]
Check<jmol>
[[Category: unknown function]]
  <jmolCheckbox>
[[Category: yp_299883.1]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bf/3bf4_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 11:55:12 2008''
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bf4 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Cupriavidus pinatubonensis JMP134]]
[[Category: Large Structures]]
Retrieved from "https://proteopedia.org/3bf4"