3n79: Difference between revisions

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{{Seed}}
[[Image:3n79.png|left|200px]]


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==PduT C38S Mutant from Salmonella enterica Typhimurium==
The line below this paragraph, containing "STRUCTURE_3n79", creates the "Structure Box" on the page.
<StructureSection load='3n79' size='340' side='right'caption='[[3n79]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3n79]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N79 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3n79|  PDB=3n79  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n79 OCA], [https://pdbe.org/3n79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n79 RCSB], [https://www.ebi.ac.uk/pdbsum/3n79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n79 ProSAT]</span></td></tr>
 
</table>
===PduT C38S Mutant from Salmonella enterica Typhimurium===
== Function ==
 
[https://www.uniprot.org/uniprot/PDUT_SALTY PDUT_SALTY] A minor shell protein of the bacterial microcompartment (BMC) dedicated to 1,2-propanediol (1,2-PD) degradation. The isolated BMC shell component protein ratio for J:A:B':B:K:T:U is approximately 15:10:7:6:1:1:2 (PubMed:12923081). Not required for structural integrity of BMCs nor to mitigate propionaldehyde toxicity, may selectively transport specific metabolites (PubMed:21239588). May be involved in electron transport across the BMC shell (Probable). Can be engineered to alter permeability of the BMC shell (PubMed:31674899).<ref>PMID:12923081</ref> <ref>PMID:21239588</ref> <ref>PMID:31674899</ref> <ref>PMID:20870711</ref>  The 1,2-PD-specific bacterial microcompartment (BMC) concentrates low levels of 1,2-PD catabolic enzymes, concentrates volatile reaction intermediates thus enhancing pathway flux and keeps the level of toxic, mutagenic propionaldehyde low.<ref>PMID:28475631</ref>
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_20870711}}, adds the Publication Abstract to the page
Check<jmol>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n7/3n79_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_20870711}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3N79 is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N79 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3n79 ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
<ref group="xtra">PMID:20870711</ref><references group="xtra"/>
<references/>
[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
__TOC__
[[Category: Cascio, D.]]
</StructureSection>
[[Category: Crowley, C S.]]
[[Category: Large Structures]]
[[Category: Sawaya, M R.]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
[[Category: Yeates, T O.]]
[[Category: Cascio D]]
[[Category: Bmc shell protein]]
[[Category: Crowley CS]]
[[Category: Carboxysome]]
[[Category: Sawaya MR]]
[[Category: Electron transport]]
[[Category: Yeates TO]]
[[Category: Fes cluster]]
[[Category: Pdu]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec  8 11:18:08 2010''
Retrieved from "https://proteopedia.org/3n79"