3f8l: Difference between revisions

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{{Seed}}
[[Image:3f8l.png|left|200px]]


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==Crystal Structure of the Effector Domain of PhnF from Mycobacterium smegmatis==
The line below this paragraph, containing "STRUCTURE_3f8l", creates the "Structure Box" on the page.
<StructureSection load='3f8l' size='340' side='right'caption='[[3f8l]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3f8l]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycolicibacterium_smegmatis_MC2_155 Mycolicibacterium smegmatis MC2 155]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F8L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F8L FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3f8l|  PDB=3f8l  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f8l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f8l OCA], [https://pdbe.org/3f8l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f8l RCSB], [https://www.ebi.ac.uk/pdbsum/3f8l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f8l ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of the Effector Domain of PhnF from Mycobacterium smegmatis===
== Function ==
 
[https://www.uniprot.org/uniprot/PHNF_MYCS2 PHNF_MYCS2] Represses the phnDCE operon, involved in the uptake of phosphate, under conditions of phosphate availability in the cell.<ref>PMID:18083811</ref>
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3F8L is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Mycobacterium_smegmatis Mycobacterium smegmatis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F8L OCA].  
Check<jmol>
[[Category: Mycobacterium smegmatis]]
  <jmolCheckbox>
[[Category: Baker, E N.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f8/3f8l_consurf.spt"</scriptWhenChecked>
[[Category: Busby, J N.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Cook, G M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Gebhard, S.]]
  </jmolCheckbox>
[[Category: Lott, S J.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f8l ConSurf].
[[Category: Money, V A.]]
<div style="clear:both"></div>
[[Category: Dna-binding]]
== References ==
[[Category: Gntr]]
<references/>
[[Category: Hutc]]
__TOC__
[[Category: Phnf]]
</StructureSection>
[[Category: Regulator]]
[[Category: Large Structures]]
[[Category: Transcription]]
[[Category: Mycolicibacterium smegmatis MC2 155]]
[[Category: Transcription regulation]]
[[Category: Baker EN]]
[[Category: Utra]]
[[Category: Busby JN]]
 
[[Category: Cook GM]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 15 08:15:10 2010''
[[Category: Gebhard S]]
[[Category: Lott SJ]]
[[Category: Money VA]]
Retrieved from "https://proteopedia.org/3f8l"