2e6k: Difference between revisions

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New page: left|200px<br /><applet load="2e6k" size="350" color="white" frame="true" align="right" spinBox="true" caption="2e6k, resolution 2.09Å" /> '''X-ray structure of T...
 
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[[Image:2e6k.jpg|left|200px]]<br /><applet load="2e6k" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2e6k, resolution 2.09&Aring;" />
'''X-ray structure of Thermus thermopilus HB8 TT0505'''<br />


==About this Structure==
==X-ray structure of Thermus thermopilus HB8 TT0505==
2E6K is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Active as [http://en.wikipedia.org/wiki/Transketolase Transketolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.2.1.1 2.2.1.1] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E6K OCA].  
<StructureSection load='2e6k' size='340' side='right'caption='[[2e6k]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Thermus thermophilus]]
<table><tr><td colspan='2'>[[2e6k]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E6K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E6K FirstGlance]. <br>
[[Category: Transketolase]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
[[Category: Agari, Y.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Ebihara, A.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e6k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e6k OCA], [https://pdbe.org/2e6k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e6k RCSB], [https://www.ebi.ac.uk/pdbsum/2e6k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e6k ProSAT], [https://www.topsan.org/Proteins/RSGI/2e6k TOPSAN]</span></td></tr>
[[Category: Iino, H.]]
</table>
[[Category: Kamitori, S.]]
== Function ==
[[Category: Kanagawa, M.]]
[https://www.uniprot.org/uniprot/Q5SM35_THET8 Q5SM35_THET8]  
[[Category: Kuramitsu, S.]]
== Evolutionary Conservation ==
[[Category: Nakagawa, N.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
Check<jmol>
[[Category: Yokoyama, S.]]
  <jmolCheckbox>
[[Category: Yoshida, H.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e6/2e6k_consurf.spt"</scriptWhenChecked>
[[Category: national project on protein structural and functional analyses]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: nppsfa]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: riken structural genomics/proteomics initiative]]
  </jmolCheckbox>
[[Category: rsgi]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e6k ConSurf].
[[Category: structural genomics]]
<div style="clear:both"></div>
[[Category: transferase]]
[[Category: transketolase]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 12:13:58 2008''
==See Also==
*[[Transketolase 3D structures|Transketolase 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Agari Y]]
[[Category: Ebihara A]]
[[Category: Iino H]]
[[Category: Kamitori S]]
[[Category: Kanagawa M]]
[[Category: Kuramitsu S]]
[[Category: Nakagawa N]]
[[Category: Yokoyama S]]
[[Category: Yoshida H]]