3l9e: Difference between revisions

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[[Image:3l9e.png|left|200px]]


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==Crystal structures of holo and Cu-deficient Cu/ZnSOD from the silkworm Bombyx mori and the implications in Amyotrophic lateral sclerosis==
The line below this paragraph, containing "STRUCTURE_3l9e", creates the "Structure Box" on the page.
<StructureSection load='3l9e' size='340' side='right'caption='[[3l9e]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3l9e]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L9E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L9E FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3l9e|  PDB=3l9e  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l9e OCA], [https://pdbe.org/3l9e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l9e RCSB], [https://www.ebi.ac.uk/pdbsum/3l9e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l9e ProSAT]</span></td></tr>
 
</table>
===Crystal structures of holo and Cu-deficient Cu/ZnSOD from the silkworm Bombyx mori and the implications in Amyotrophic lateral sclerosis===
== Function ==
 
[https://www.uniprot.org/uniprot/SODC_BOMMO SODC_BOMMO] Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity).[UniProtKB:P00441]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
[[3l9e]] is a 4 chain structure of [[Superoxide Dismutase]] with sequence from [http://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L9E OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l9/3l9e_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l9e ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Superoxide Dismutase]]
*[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:20310068</ref><references group="xtra"/>
[[Category: Bombyx mori]]
[[Category: Bombyx mori]]
[[Category: Superoxide dismutase]]
[[Category: Large Structures]]
[[Category: Chen, Y.]]
[[Category: Chen Y]]
[[Category: He, Y X.]]
[[Category: He Y-X]]
[[Category: Li, W F.]]
[[Category: Li W-F]]
[[Category: Teng, Y B.]]
[[Category: Teng Y-B]]
[[Category: Yan, L F.]]
[[Category: Yan L-F]]
[[Category: Yu, J.]]
[[Category: Yu J]]
[[Category: Zhang, G Z.]]
[[Category: Zhang G-Z]]
[[Category: Zhang, N N.]]
[[Category: Zhang N-N]]
[[Category: Zhao, F.]]
[[Category: Zhao F]]
[[Category: Zhou, C Z.]]
[[Category: Zhou C-Z]]
[[Category: Antioxidant]]
[[Category: Cytoplasm]]
[[Category: Disulfide bond]]
[[Category: Greek-key-barrel]]
[[Category: Metal-binding]]
[[Category: Oxidoreductase]]
[[Category: Zinc]]
Retrieved from "https://proteopedia.org/3l9e"