1dm5: Difference between revisions

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[[Image:1dm5.png|left|200px]]


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==ANNEXIN XII E105K HOMOHEXAMER CRYSTAL STRUCTURE==
The line below this paragraph, containing "STRUCTURE_1dm5", creates the "Structure Box" on the page.
<StructureSection load='1dm5' size='340' side='right'caption='[[1dm5]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1dm5]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Hydra_vulgaris Hydra vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DM5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
{{STRUCTURE_1dm5|  PDB=1dm5  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dm5 OCA], [https://pdbe.org/1dm5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dm5 RCSB], [https://www.ebi.ac.uk/pdbsum/1dm5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dm5 ProSAT]</span></td></tr>
 
</table>
===ANNEXIN XII E105K HOMOHEXAMER CRYSTAL STRUCTURE===
== Function ==
 
[https://www.uniprot.org/uniprot/ANX12_HYDVU ANX12_HYDVU]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_10704197}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 10704197 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dm/1dm5_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_10704197}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
[[1dm5]] is a 6 chain structure of [[Annexin]] with sequence from [http://en.wikipedia.org/wiki/Hydra_vulgaris Hydra vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DM5 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dm5 ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Annexin]]
*[[Annexin 3D structures|Annexin 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:10704197</ref><references group="xtra"/>
[[Category: Hydra vulgaris]]
[[Category: Hydra vulgaris]]
[[Category: Cartailler, J P.]]
[[Category: Large Structures]]
[[Category: Haigler, H T.]]
[[Category: Cartailler JP]]
[[Category: Luecke, H.]]
[[Category: Haigler HT]]
[[Category: E105k epsilon amino group replaces intermolecular calcium]]
[[Category: Luecke H]]
[[Category: Homohexamer]]
[[Category: Low calcium form]]
[[Category: Mixed typeii/typeiii calcium binding site]]
[[Category: Novel ph-dependent hexamerization switch e76]]
[[Category: Unknown function]]
Retrieved from "https://proteopedia.org/1dm5"