3tgl: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
m Protected "3tgl" [edit=sysop:move=sysop]
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3tgl.png|left|200px]]


<!--
==STRUCTURE AND MOLECULAR MODEL REFINEMENT OF RHIZOMUCOR MIEHEI TRIACYLGLYCERIDE LIPASE: A CASE STUDY OF THE USE OF SIMULATED ANNEALING IN PARTIAL MODEL REFINEMENT==
The line below this paragraph, containing "STRUCTURE_3tgl", creates the "Structure Box" on the page.
<StructureSection load='3tgl' size='340' side='right'caption='[[3tgl]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3tgl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhizomucor_miehei Rhizomucor miehei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TGL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TGL FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tgl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tgl OCA], [https://pdbe.org/3tgl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tgl RCSB], [https://www.ebi.ac.uk/pdbsum/3tgl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tgl ProSAT]</span></td></tr>
{{STRUCTURE_3tgl|  PDB=3tgl  |  SCENE=  }}
</table>
 
== Function ==
===STRUCTURE AND MOLECULAR MODEL REFINEMENT OF RHIZOMUCOR MIEHEI TRIACYLGLYCERIDE LIPASE: A CASE STUDY OF THE USE OF SIMULATED ANNEALING IN PARTIAL MODEL REFINEMENT===
[https://www.uniprot.org/uniprot/LIP_RHIMI LIP_RHIMI]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
[[3tgl]] is a 1 chain structure of [[Lipase]] with sequence from [http://en.wikipedia.org/wiki/Rhizomucor_miehei Rhizomucor miehei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TGL OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tg/3tgl_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3tgl ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Lipase]]
*[[Lipase 3D Structures|Lipase 3D Structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Rhizomucor miehei]]
[[Category: Rhizomucor miehei]]
[[Category: Triacylglycerol lipase]]
[[Category: Brady L]]
[[Category: Brady, L.]]
[[Category: Brzozowski AM]]
[[Category: Brzozowski, A M.]]
[[Category: Christiansen L]]
[[Category: Christiansen, L.]]
[[Category: Derewenda ZS]]
[[Category: Derewenda, Z S.]]
[[Category: Dodson EJ]]
[[Category: Dodson, E J.]]
[[Category: Dodson GG]]
[[Category: Dodson, G G.]]
[[Category: Huge-Jensen B]]
[[Category: Huge-Jensen, B.]]
[[Category: Norskov L]]
[[Category: Norskov, L.]]
[[Category: Thim L]]
[[Category: Thim, L.]]
[[Category: Tolley SP]]
[[Category: Tolley, S P.]]
[[Category: Turkenburg JP]]
[[Category: Turkenburg, J P.]]
Retrieved from "https://proteopedia.org/3tgl"