2rhd: Difference between revisions

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New page: left|200px<br /><applet load="2rhd" size="350" color="white" frame="true" align="right" spinBox="true" caption="2rhd, resolution 2.06Å" /> '''Crystal structure of...
 
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[[Image:2rhd.jpg|left|200px]]<br /><applet load="2rhd" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2rhd, resolution 2.06&Aring;" />
'''Crystal structure of Cryptosporidium parvum small GTPase RAB1A'''<br />


==About this Structure==
==Crystal structure of Cryptosporidium parvum small GTPase RAB1A==
2RHD is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Cryptosporidium_parvum Cryptosporidium parvum] with <scene name='pdbligand=MG:'>MG</scene> and <scene name='pdbligand=GDP:'>GDP</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RHD OCA].  
<StructureSection load='2rhd' size='340' side='right'caption='[[2rhd]], [[Resolution|resolution]] 2.06&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2rhd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptosporidium_parvum Cryptosporidium parvum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RHD FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.06&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rhd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rhd OCA], [https://pdbe.org/2rhd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rhd RCSB], [https://www.ebi.ac.uk/pdbsum/2rhd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rhd ProSAT]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rh/2rhd_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rhd ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[GTP-binding protein 3D structures|GTP-binding protein 3D structures]]
__TOC__
</StructureSection>
[[Category: Cryptosporidium parvum]]
[[Category: Cryptosporidium parvum]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Arrowsmith, C.H.]]
[[Category: Arrowsmith CH]]
[[Category: Bochkarev, A.]]
[[Category: Bochkarev A]]
[[Category: Dong, A.]]
[[Category: Dong A]]
[[Category: Edwards, A.M.]]
[[Category: Edwards AM]]
[[Category: Hui, R.]]
[[Category: Hui R]]
[[Category: Khuu, C.]]
[[Category: Khuu C]]
[[Category: Kozieradzki, I.]]
[[Category: Kozieradzki I]]
[[Category: Lew, J.]]
[[Category: Lew J]]
[[Category: Lin, Y.H.]]
[[Category: Lin YH]]
[[Category: Qiu, W.]]
[[Category: Qiu W]]
[[Category: SGC, Structural.Genomics.Consortium.]]
[[Category: Sukumar D]]
[[Category: Sukumar, D.]]
[[Category: Sun X]]
[[Category: Sun, X.]]
[[Category: Sundstrom M]]
[[Category: Sundstrom, M.]]
[[Category: Weigelt J]]
[[Category: Weigelt, J.]]
[[Category: Xu X]]
[[Category: Xu, X.]]
[[Category: GDP]]
[[Category: MG]]
[[Category: cryptosporidium parvum]]
[[Category: gtp-binding]]
[[Category: gtpase]]
[[Category: in situ]]
[[Category: nucleotide binding protein]]
[[Category: nucleotide-binding]]
[[Category: proteolysis]]
[[Category: rab1a]]
[[Category: sgc]]
[[Category: structural genomics]]
[[Category: structural genomics consortium]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 12:45:31 2008''

Latest revision as of 11:57, 30 August 2023

Crystal structure of Cryptosporidium parvum small GTPase RAB1A

2rhd, resolution 2.06Å

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