2raq: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
New page: left|200px<br /><applet load="2raq" size="350" color="white" frame="true" align="right" spinBox="true" caption="2raq, resolution 3.11Å" /> '''Crystal structure of...
 
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2raq.gif|left|200px]]<br /><applet load="2raq" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2raq, resolution 3.11&Aring;" />
'''Crystal structure of the MTH889 protein from Methanothermobacter thermautotrophicus. Northeast Structural Genomics Consortium target TT205'''<br />


==About this Structure==
==Crystal structure of the MTH889 protein from Methanothermobacter thermautotrophicus. Northeast Structural Genomics Consortium target TT205==
2RAQ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus_str._delta_h Methanothermobacter thermautotrophicus str. delta h] with <scene name='pdbligand=CA:'>CA</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RAQ OCA].
<StructureSection load='2raq' size='340' side='right'caption='[[2raq]], [[Resolution|resolution]] 3.11&Aring;' scene=''>
[[Category: Methanothermobacter thermautotrophicus str. delta h]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2raq]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus_str._Delta_H Methanothermobacter thermautotrophicus str. Delta H]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RAQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RAQ FirstGlance]. <br>
[[Category: Acton, T.B.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.11&#8491;</td></tr>
[[Category: Arrowsmith, C.H.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Baran, M.C.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2raq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2raq OCA], [https://pdbe.org/2raq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2raq RCSB], [https://www.ebi.ac.uk/pdbsum/2raq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2raq ProSAT], [https://www.topsan.org/Proteins/NESGC/2raq TOPSAN]</span></td></tr>
[[Category: Conover, K.]]
</table>
[[Category: Forouhar, F.]]
== Function ==
[[Category: Hunt, J.F.]]
[https://www.uniprot.org/uniprot/O26975_METTH O26975_METTH]  
[[Category: Ma, L-C.]]
== Evolutionary Conservation ==
[[Category: Mao, L.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Montelione, G.T.]]
Check<jmol>
[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
  <jmolCheckbox>
[[Category: Seetharaman, J.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2raq_consurf.spt"</scriptWhenChecked>
[[Category: Su, M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Tong, L.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Xiao, R.]]
  </jmolCheckbox>
[[Category: Xu, X.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2raq ConSurf].
[[Category: CA]]
<div style="clear:both"></div>
[[Category: alpha-beta protein]]
__TOC__
[[Category: nesg]]
</StructureSection>
[[Category: northeast structural genomics consortium]]
[[Category: Large Structures]]
[[Category: protein structure initiative]]
[[Category: Methanothermobacter thermautotrophicus str. Delta H]]
[[Category: psi-2]]
[[Category: Acton TB]]
[[Category: structural genomics]]
[[Category: Arrowsmith CH]]
[[Category: unknown function]]
[[Category: Baran MC]]
 
[[Category: Conover K]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 12:54:25 2008''
[[Category: Forouhar F]]
[[Category: Hunt JF]]
[[Category: Ma L-C]]
[[Category: Mao L]]
[[Category: Montelione GT]]
[[Category: Seetharaman J]]
[[Category: Su M]]
[[Category: Tong L]]
[[Category: Xiao R]]
[[Category: Xu X]]
Retrieved from "https://proteopedia.org/2raq"