2dy3: Difference between revisions
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New page: left|200px<br /><applet load="2dy3" size="350" color="white" frame="true" align="right" spinBox="true" caption="2dy3, resolution 2.1Å" /> '''Crystal Structure of ... |
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== | ==Crystal Structure of alanine racemase from Corynebacterium glutamicum== | ||
<StructureSection load='2dy3' size='340' side='right'caption='[[2dy3]], [[Resolution|resolution]] 2.10Å' scene=''> | |||
[[ | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2dy3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum Corynebacterium glutamicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DY3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DY3 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dy3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dy3 OCA], [https://pdbe.org/2dy3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dy3 RCSB], [https://www.ebi.ac.uk/pdbsum/2dy3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dy3 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/ALR_CORGL ALR_CORGL] Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids (By similarity).[HAMAP-Rule:MF_01201] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dy/2dy3_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dy3 ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Alanine racemase 3D structures|Alanine racemase 3D structures]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Corynebacterium glutamicum]] | [[Category: Corynebacterium glutamicum]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Kato | [[Category: Kato R]] | ||
[[Category: Miyaguchi | [[Category: Miyaguchi I]] | ||
[[Category: Oikawa | [[Category: Oikawa T]] | ||
[[Category: Sasaki | [[Category: Sasaki C]] | ||
[[Category: Sugio | [[Category: Sugio S]] | ||
Latest revision as of 08:32, 25 October 2023
Crystal Structure of alanine racemase from Corynebacterium glutamicum
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