2eh3: Difference between revisions

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New page: left|200px<br /><applet load="2eh3" size="350" color="white" frame="true" align="right" spinBox="true" caption="2eh3, resolution 1.55Å" /> '''Crystal structure of...
 
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[[Image:2eh3.jpg|left|200px]]<br /><applet load="2eh3" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2eh3, resolution 1.55&Aring;" />
'''Crystal structure of aq_1058, a transcriptional regulator (TerR/AcrR family) from Aquifex aeolicus VF5'''<br />


==About this Structure==
==Crystal structure of aq_1058, a transcriptional regulator (TerR/AcrR family) from Aquifex aeolicus VF5==
2EH3 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EH3 OCA].  
<StructureSection load='2eh3' size='340' side='right'caption='[[2eh3]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
[[Category: Aquifex aeolicus]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2eh3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EH3 FirstGlance]. <br>
[[Category: Agari, Y.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
[[Category: Kuramitsu, S.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eh3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eh3 OCA], [https://pdbe.org/2eh3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eh3 RCSB], [https://www.ebi.ac.uk/pdbsum/2eh3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eh3 ProSAT], [https://www.topsan.org/Proteins/RSGI/2eh3 TOPSAN]</span></td></tr>
[[Category: Shinkai, A.]]
</table>
[[Category: Yokoyama, S.]]
== Function ==
[[Category: MG]]
[https://www.uniprot.org/uniprot/O67157_AQUAE O67157_AQUAE]  
[[Category: all alpha proteins]]
== Evolutionary Conservation ==
[[Category: c-terminal domain]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: dna/rna-binding 3-helical bundle]]
Check<jmol>
[[Category: helix-turn-helix]]
  <jmolCheckbox>
[[Category: homeodomain-like]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eh/2eh3_consurf.spt"</scriptWhenChecked>
[[Category: national project on protein structural and functional analyses]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: nppsfa]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: riken structural genomics/proteomics initiative]]
  </jmolCheckbox>
[[Category: rsgi]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eh3 ConSurf].
[[Category: structural genomics]]
<div style="clear:both"></div>
[[Category: tetracyclin repressor-like]]
[[Category: transcription]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 13:45:31 2008''
==See Also==
*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]]
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
__TOC__
</StructureSection>
[[Category: Aquifex aeolicus VF5]]
[[Category: Large Structures]]
[[Category: Agari Y]]
[[Category: Kuramitsu S]]
[[Category: Shinkai A]]
[[Category: Yokoyama S]]
Retrieved from "https://proteopedia.org/2eh3"