2qyv: Difference between revisions

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New page: left|200px<br /><applet load="2qyv" size="350" color="white" frame="true" align="right" spinBox="true" caption="2qyv, resolution 2.110Å" /> '''Crystal structure o...
 
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[[Image:2qyv.jpg|left|200px]]<br /><applet load="2qyv" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2qyv, resolution 2.110&Aring;" />
'''Crystal structure of putative Xaa-His dipeptidase (YP_718209.1) from Haemophilus somnus 129PT at 2.11 A resolution'''<br />


==About this Structure==
==Crystal structure of putative Xaa-His dipeptidase (YP_718209.1) from Haemophilus somnus 129PT at 2.11 A resolution==
2QYV is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Haemophilus_somnus_129pt Haemophilus somnus 129pt] with <scene name='pdbligand=ZN:'>ZN</scene>, <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=GOL:'>GOL</scene> and <scene name='pdbligand=IPA:'>IPA</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Xaa-His_dipeptidase Xaa-His dipeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.13.3 3.4.13.3] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYV OCA].  
<StructureSection load='2qyv' size='340' side='right'caption='[[2qyv]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
[[Category: Haemophilus somnus 129pt]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2qyv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Histophilus_somni_129PT Histophilus somni 129PT]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QYV FirstGlance]. <br>
[[Category: Xaa-His dipeptidase]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
[[Category: JCSG, Joint.Center.for.Structural.Genomics.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[Category: GOL]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qyv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qyv OCA], [https://pdbe.org/2qyv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qyv RCSB], [https://www.ebi.ac.uk/pdbsum/2qyv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qyv ProSAT], [https://www.topsan.org/Proteins/JCSG/2qyv TOPSAN]</span></td></tr>
[[Category: IPA]]
</table>
[[Category: SO4]]
== Function ==
[[Category: ZN]]
[https://www.uniprot.org/uniprot/Q0I1B9_HISS1 Q0I1B9_HISS1]  
[[Category: hydrolase]]
== Evolutionary Conservation ==
[[Category: jcsg]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: joint center for structural genomics]]
Check<jmol>
[[Category: protein structure initiative]]
  <jmolCheckbox>
[[Category: psi-2]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qy/2qyv_consurf.spt"</scriptWhenChecked>
[[Category: putative xaa-his dipeptidase]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: yp_718209.1]]
  </jmolCheckbox>
 
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qyv ConSurf].
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 13:54:41 2008''
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Histophilus somni 129PT]]
[[Category: Large Structures]]

Latest revision as of 08:36, 30 October 2024

Crystal structure of putative Xaa-His dipeptidase (YP_718209.1) from Haemophilus somnus 129PT at 2.11 A resolution

2qyv, resolution 2.11Å

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