3dvw: Difference between revisions

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[[Image:3dvw.png|left|200px]]


<!--
==Crystal structure of reduced DsbA1 from Neisseria meningitidis==
The line below this paragraph, containing "STRUCTURE_3dvw", creates the "Structure Box" on the page.
<StructureSection load='3dvw' size='340' side='right'caption='[[3dvw]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dvw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DVW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DVW FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dvw OCA], [https://pdbe.org/3dvw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dvw RCSB], [https://www.ebi.ac.uk/pdbsum/3dvw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dvw ProSAT]</span></td></tr>
{{STRUCTURE_3dvw|  PDB=3dvw  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of reduced DsbA1 from Neisseria meningitidis===
[https://www.uniprot.org/uniprot/Q9K189_NEIMB Q9K189_NEIMB]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
<!--
Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_19631659}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 19631659 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dv/3dvw_consurf.spt"</scriptWhenChecked>
-->
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_19631659}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dvw ConSurf].
[[3dvw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis_mc58 Neisseria meningitidis mc58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DVW OCA].  
<div style="clear:both"></div>
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:19631659</ref><ref group="xtra">PMID:18259062</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: Neisseria meningitidis mc58]]
[[Category: Neisseria meningitidis MC58]]
[[Category: Lafaye, C.]]
[[Category: Lafaye C]]
[[Category: Serre, L.]]
[[Category: Serre L]]
[[Category: Disulfide bond]]
[[Category: Dsba]]
[[Category: Neisseria]]
[[Category: Thiol-oxidoreductase]]
Retrieved from "https://proteopedia.org/3dvw"