3imb: Difference between revisions

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[[Image:3imb.png|left|200px]]


<!--
==Alternative binding mode of restriction endonuclease BcnI to cognate DNA==
The line below this paragraph, containing "STRUCTURE_3imb", creates the "Structure Box" on the page.
<StructureSection load='3imb' size='340' side='right'caption='[[3imb]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3imb]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Brevibacillus_centrosporus Brevibacillus centrosporus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IMB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IMB FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3imb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3imb OCA], [https://pdbe.org/3imb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3imb RCSB], [https://www.ebi.ac.uk/pdbsum/3imb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3imb ProSAT]</span></td></tr>
{{STRUCTURE_3imb|  PDB=3imb  |  SCENE=  }}
</table>
 
== Function ==
===Alternative binding mode of restriction endonuclease BcnI to cognate DNA===
[https://www.uniprot.org/uniprot/Q8RNV8_9BACL Q8RNV8_9BACL]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
<!--
Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_17445830}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 17445830 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/im/3imb_consurf.spt"</scriptWhenChecked>
-->
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_17445830}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3imb ConSurf].
[[3imb]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Brevibacillus_centrosporus Brevibacillus centrosporus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IMB OCA].  
<div style="clear:both"></div>
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:17445830</ref><ref group="xtra">PMID:17568994</ref><references group="xtra"/>
[[Category: Brevibacillus centrosporus]]
[[Category: Brevibacillus centrosporus]]
[[Category: Bochtler, M.]]
[[Category: Large Structures]]
[[Category: Czapinska, H.]]
[[Category: Bochtler M]]
[[Category: Kaus-Drobek, M.]]
[[Category: Czapinska H]]
[[Category: Siksnys, V.]]
[[Category: Kaus-Drobek M]]
[[Category: Sokolowska, M.]]
[[Category: Siksnys V]]
[[Category: Szczepanowski, R H.]]
[[Category: Sokolowska M]]
[[Category: Tamulaitis, G.]]
[[Category: Szczepanowski RH]]
[[Category: Bcni]]
[[Category: Tamulaitis G]]
[[Category: Endonuclease-dna complex]]
[[Category: Hydrolase-dna complex]]
[[Category: Pseudopalindromic sequence recognition]]
[[Category: Pseudosymmetry]]
[[Category: Restriction enzyme]]

Latest revision as of 16:00, 1 November 2023

Alternative binding mode of restriction endonuclease BcnI to cognate DNA

3imb, resolution 1.89Å

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