2ppx: Difference between revisions
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New page: left|200px<br /><applet load="2ppx" size="350" color="white" frame="true" align="right" spinBox="true" caption="2ppx, resolution 2.00Å" /> '''Crystal structure of... |
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== | ==Crystal structure of a HTH XRE-family like protein from Agrobacterium tumefaciens== | ||
<StructureSection load='2ppx' size='340' side='right'caption='[[2ppx]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2ppx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PPX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PPX FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | |||
[ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
[[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ppx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ppx OCA], [https://pdbe.org/2ppx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ppx RCSB], [https://www.ebi.ac.uk/pdbsum/2ppx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ppx ProSAT], [https://www.topsan.org/Proteins/MCSG/2ppx TOPSAN]</span></td></tr> | ||
[ | </table> | ||
[[ | == Evolutionary Conservation == | ||
[ | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pp/2ppx_consurf.spt"</scriptWhenChecked> | |||
[[Category: | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
[[Category: | <text>to colour the structure by Evolutionary Conservation</text> | ||
[[Category: | </jmolCheckbox> | ||
[[Category: | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ppx ConSurf]. | ||
[[Category: | <div style="clear:both"></div> | ||
[[Category: | __TOC__ | ||
[[Category: | </StructureSection> | ||
[[Category: | [[Category: Agrobacterium fabrum str. C58]] | ||
[[Category: Large Structures]] | |||
[[Category: Cuff ME]] | |||
[[Category: Edwards A]] | |||
[[Category: Joachimiak A]] | |||
[[Category: Onopriyenko O]] | |||
[[Category: Savchenko A]] | |||
[[Category: Skarina T]] | |||
Latest revision as of 01:19, 21 November 2024
Crystal structure of a HTH XRE-family like protein from Agrobacterium tumefaciens
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