1akv: Difference between revisions

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[[Image:1akv.png|left|200px]]


<!--
==D95A SEMIQUINONE FLAVODOXIN MUTANT FROM D. VULGARIS==
The line below this paragraph, containing "STRUCTURE_1akv", creates the "Structure Box" on the page.
<StructureSection load='1akv' size='340' side='right'caption='[[1akv]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1akv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._Hildenborough Desulfovibrio vulgaris str. Hildenborough]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AKV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AKV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1akv|  PDB=1akv  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1akv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1akv OCA], [https://pdbe.org/1akv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1akv RCSB], [https://www.ebi.ac.uk/pdbsum/1akv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1akv ProSAT]</span></td></tr>
 
</table>
===D95A SEMIQUINONE FLAVODOXIN MUTANT FROM D. VULGARIS===
== Function ==
 
[https://www.uniprot.org/uniprot/FLAV_DESVH FLAV_DESVH] Low-potential electron donor to a number of redox enzymes.
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_12206666}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 12206666 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ak/1akv_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_12206666}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
[[1akv]] is a 1 chain structure of [[Flavodoxin]] with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._hildenborough Desulfovibrio vulgaris str. hildenborough]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AKV OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1akv ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Flavodoxin]]
*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:012206666</ref><references group="xtra"/>
[[Category: Desulfovibrio vulgaris str. Hildenborough]]
[[Category: Desulfovibrio vulgaris str. hildenborough]]
[[Category: Large Structures]]
[[Category: Higgins, T.]]
[[Category: Higgins T]]
[[Category: Mccarthy, A.]]
[[Category: Mccarthy A]]
[[Category: Walsh, M.]]
[[Category: Walsh M]]
[[Category: Electron transfer]]
[[Category: Electron transport]]
[[Category: Flavodoxin]]
[[Category: Flavoprotein]]
[[Category: Fmn]]
[[Category: Mutant]]

Latest revision as of 06:31, 7 February 2024

D95A SEMIQUINONE FLAVODOXIN MUTANT FROM D. VULGARIS

1akv, resolution 2.00Å

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