2cyj: Difference between revisions

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New page: left|200px<br /><applet load="2cyj" size="350" color="white" frame="true" align="right" spinBox="true" caption="2cyj, resolution 1.50Å" /> '''Crystal structure of...
 
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[[Image:2cyj.gif|left|200px]]<br /><applet load="2cyj" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2cyj, resolution 1.50&Aring;" />
'''Crystal structure of conserved hypothetical protein PH1505 from Pyrococcus horikoshii OT3'''<br />


==About this Structure==
==Crystal structure of conserved hypothetical protein PH1505 from Pyrococcus horikoshii OT3==
2CYJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii_ot3 Pyrococcus horikoshii ot3] with <scene name='pdbligand=ACT:'>ACT</scene>, <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=CYO:'>CYO</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CYJ OCA].
<StructureSection load='2cyj' size='340' side='right'caption='[[2cyj]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
[[Category: Pyrococcus horikoshii ot3]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2cyj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CYJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CYJ FirstGlance]. <br>
[[Category: Arai, R.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
[[Category: Ito, K.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Kamo-Uchikubo, T.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cyj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cyj OCA], [https://pdbe.org/2cyj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cyj RCSB], [https://www.ebi.ac.uk/pdbsum/2cyj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cyj ProSAT], [https://www.topsan.org/Proteins/RSGI/2cyj TOPSAN]</span></td></tr>
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
</table>
[[Category: Shirouzu, M.]]
== Function ==
[[Category: Yokoyama, S.]]
[https://www.uniprot.org/uniprot/O59174_PYRHO O59174_PYRHO]  
[[Category: ACT]]
== Evolutionary Conservation ==
[[Category: CYO]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: SO4]]
Check<jmol>
[[Category: conserved hypothetical protein]]
  <jmolCheckbox>
[[Category: national project on protein structural and functional analyses]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cy/2cyj_consurf.spt"</scriptWhenChecked>
[[Category: nppsfa]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: riken structural genomics/proteomics initiative]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: rsgi]]
  </jmolCheckbox>
[[Category: structural genomics]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cyj ConSurf].
 
<div style="clear:both"></div>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 18:51:07 2008''
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Arai R]]
[[Category: Ito K]]
[[Category: Kamo-Uchikubo T]]
[[Category: Shirouzu M]]
[[Category: Yokoyama S]]