3ic5: Difference between revisions

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[[Image:3ic5.png|left|200px]]


<!--
==N-terminal domain of putative saccharopine dehydrogenase from Ruegeria pomeroyi.==
The line below this paragraph, containing "STRUCTURE_3ic5", creates the "Structure Box" on the page.
<StructureSection load='3ic5' size='340' side='right'caption='[[3ic5]], [[Resolution|resolution]] 2.08&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ic5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_pomeroyi Ruegeria pomeroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IC5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IC5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.08&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3ic5|  PDB=3ic5  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ic5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ic5 OCA], [https://pdbe.org/3ic5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ic5 RCSB], [https://www.ebi.ac.uk/pdbsum/3ic5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ic5 ProSAT]</span></td></tr>
 
</table>
===N-terminal domain of putative saccharopine dehydrogenase from Ruegeria pomeroyi.===
== Function ==
 
[https://www.uniprot.org/uniprot/Q5LX24_RUEPO Q5LX24_RUEPO]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
[[3ic5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruegeria_pomeroyi Ruegeria pomeroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IC5 OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ic/3ic5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ic5 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Ruegeria pomeroyi]]
[[Category: Ruegeria pomeroyi]]
[[Category: Freeman, L.]]
[[Category: Freeman L]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Osipiuk J]]
[[Category: Osipiuk, J.]]
[[Category: Tesar C]]
[[Category: Tesar, C.]]
[[Category: Apc63807 2]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: N-terminal domain]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Saccharopine dehydrogenase]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
Retrieved from "https://proteopedia.org/3ic5"