2d16: Difference between revisions

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New page: left|200px<br /><applet load="2d16" size="350" color="white" frame="true" align="right" spinBox="true" caption="2d16, resolution 1.65Å" /> '''Crystal Structure of...
 
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[[Image:2d16.jpg|left|200px]]<br /><applet load="2d16" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2d16, resolution 1.65&Aring;" />
'''Crystal Structure of PH1918 protein from Pyrococcus horikoshii OT3'''<br />


==About this Structure==
==Crystal Structure of PH1918 protein from Pyrococcus horikoshii OT3==
2D16 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii_ot3 Pyrococcus horikoshii ot3] with <scene name='pdbligand=NA:'>NA</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA].  
<StructureSection load='2d16' size='340' side='right'caption='[[2d16]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
[[Category: Pyrococcus horikoshii ot3]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D16 FirstGlance]. <br>
[[Category: Kunishima, N.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
[[Category: Lokanath, N.K.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [https://pdbe.org/2d16 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [https://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d16 ProSAT], [https://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>
[[Category: GOL]]
</table>
[[Category: NA]]
== Function ==
[[Category: hypothetical]]
[https://www.uniprot.org/uniprot/O59581_PYRHO O59581_PYRHO]  
[[Category: national project on protein structural and functional analyses]]
== Evolutionary Conservation ==
[[Category: nppsfa]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: riken structural genomics/proteomics initiative]]
Check<jmol>
[[Category: rsgi]]
  <jmolCheckbox>
[[Category: structural genomics]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d1/2d16_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 18:52:44 2008''
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d16 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Kunishima N]]
[[Category: Lokanath NK]]
Retrieved from "https://proteopedia.org/2d16"