2d4w: Difference between revisions

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New page: left|200px<br /><applet load="2d4w" size="350" color="white" frame="true" align="right" spinBox="true" caption="2d4w, resolution 2.30Å" /> '''Crystal structure of...
 
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[[Image:2d4w.gif|left|200px]]<br /><applet load="2d4w" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2d4w, resolution 2.30&Aring;" />
'''Crystal structure of glycerol kinase from Cellulomonas sp. NT3060'''<br />


==About this Structure==
==Crystal structure of glycerol kinase from Cellulomonas sp. NT3060==
2D4W is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Cellulomonas_sp. Cellulomonas sp.] with <scene name='pdbligand=MPD:'>MPD</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Glycerol_kinase Glycerol kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.30 2.7.1.30] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D4W OCA].
<StructureSection load='2d4w' size='340' side='right'caption='[[2d4w]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
[[Category: Cellulomonas sp.]]
== Structural highlights ==
[[Category: Glycerol kinase]]
<table><tr><td colspan='2'>[[2d4w]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cellulomonas_sp. Cellulomonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D4W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D4W FirstGlance]. <br>
[[Category: Protein complex]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
[[Category: Imada, K.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
[[Category: Inagaki, K.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d4w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d4w OCA], [https://pdbe.org/2d4w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d4w RCSB], [https://www.ebi.ac.uk/pdbsum/2d4w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d4w ProSAT]</span></td></tr>
[[Category: Namba, K.]]
</table>
[[Category: Tamura, T.]]
== Evolutionary Conservation ==
[[Category: MPD]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: actin-like atpase domain]]
Check<jmol>
[[Category: alpha and beta protein]]
  <jmolCheckbox>
[[Category: ribonuclease h-like motif]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d4/2d4w_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d4w ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 18:55:25 2008''
==See Also==
*[[Glycerol kinase|Glycerol kinase]]
__TOC__
</StructureSection>
[[Category: Cellulomonas sp]]
[[Category: Large Structures]]
[[Category: Imada K]]
[[Category: Inagaki K]]
[[Category: Namba K]]
[[Category: Tamura T]]
Retrieved from "https://proteopedia.org/2d4w"