2d5w: Difference between revisions

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New page: left|200px<br /><applet load="2d5w" size="350" color="white" frame="true" align="right" spinBox="true" caption="2d5w, resolution 1.3Å" /> '''The crystal structure...
 
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[[Image:2d5w.gif|left|200px]]<br /><applet load="2d5w" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2d5w, resolution 1.3&Aring;" />
'''The crystal structure of oligopeptide binding protein from Thermus thermophilus HB8 complexed with pentapeptide'''<br />


==About this Structure==
==The crystal structure of oligopeptide binding protein from Thermus thermophilus HB8 complexed with pentapeptide==
2D5W is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D5W OCA].  
<StructureSection load='2d5w' size='340' side='right'caption='[[2d5w]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Thermus thermophilus]]
<table><tr><td colspan='2'>[[2d5w]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D5W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D5W FirstGlance]. <br>
[[Category: Morita, A.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
[[Category: protein-peptide complex]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d5w OCA], [https://pdbe.org/2d5w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d5w RCSB], [https://www.ebi.ac.uk/pdbsum/2d5w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d5w ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5SHU6_THET8 Q5SHU6_THET8]  
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d5/2d5w_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d5w ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 18:56:02 2008''
==See Also==
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Morita A]]
Retrieved from "https://proteopedia.org/2d5w"