3ndr: Difference between revisions

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[[Image:3ndr.jpg|left|200px]]


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==Crystal structure of tetrameric pyridoxal 4-dehydrogenase from Mesorhizobium loti==
The line below this paragraph, containing "STRUCTURE_3ndr", creates the "Structure Box" on the page.
<StructureSection load='3ndr' size='340' side='right'caption='[[3ndr]], [[Resolution|resolution]] 2.88&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ndr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesorhizobium_loti Mesorhizobium loti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NDR FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.88&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
{{STRUCTURE_3ndr|  PDB=3ndr  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ndr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ndr OCA], [https://pdbe.org/3ndr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ndr RCSB], [https://www.ebi.ac.uk/pdbsum/3ndr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ndr ProSAT]</span></td></tr>
 
</table>
===Crystal structure of tetrameric pyridoxal 4-dehydrogenase from Mesorhizobium loti===
== Function ==
 
[https://www.uniprot.org/uniprot/PLDH_RHILO PLDH_RHILO] Involved in the degradation of pyridoxine or pyridoxamine (free, phosphate-unbound, forms of vitamin B6). Oxidizes pyridoxal to 4-pyridoxolactone, but does not have activity toward pyridoxal 5'-phosphate, pyridoxine, pyridoxamine, pyridoxamine 5'-phosphate, 4-phthalaldehyde, 2-nitrobenzaldehyde, pyridine, formaldehyde, 2-carboxybenzaldehyde or sugars.<ref>PMID:16824480</ref>  
 
== References ==
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<references/>
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__TOC__
(as it appears on PubMed at http://www.pubmed.gov), where 20516609 is the PubMed ID number.
</StructureSection>
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[[Category: Large Structures]]
{{ABSTRACT_PUBMED_20516609}}
 
==About this Structure==
[[3ndr]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mesorhizobium_loti Mesorhizobium loti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NDR OCA].  
 
==Reference==
<ref group="xtra">PMID:020516609</ref><references group="xtra"/>
[[Category: Mesorhizobium loti]]
[[Category: Mesorhizobium loti]]
[[Category: Pyridoxal 4-dehydrogenase]]
[[Category: Chu HN]]
[[Category: Chu, H N.]]

Latest revision as of 16:46, 1 November 2023

Crystal structure of tetrameric pyridoxal 4-dehydrogenase from Mesorhizobium loti

3ndr, resolution 2.88Å

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