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New page: left|200px<br /><applet load="2fx0" size="350" color="white" frame="true" align="right" spinBox="true" caption="2fx0, resolution 2.40Å" /> '''Crystal Structure of...
 
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[[Image:2fx0.gif|left|200px]]<br /><applet load="2fx0" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2fx0, resolution 2.40&Aring;" />
'''Crystal Structure of HlyIIR, a Hemolysin II transcriptional Regulator'''<br />


==Overview==
==Crystal Structure of HlyIIR, a Hemolysin II transcriptional Regulator==
Production of Bacillus cereus and Bacillus anthracis toxins is controlled, by a number of transcriptional regulators. Here we report the crystal, structure of B. cereus HlyIIR, a regulator of the gene encoding the, pore-forming toxin hemolysin II. We show that HlyIIR forms a tight dimer, with a fold and overall architecture similar to the TetR family of, repressors. A remarkable feature of the structure is a large internal, cavity with a volume of 550 A(3) suggesting that the activity of HlyIIR is, modulated by binding of a ligand, which triggers the toxin production., Virtual ligand library screening shows that this pocket can accommodate, compounds with molecular masses of up to 400-500 Da. Based on structural, data and previous biochemical evidence, we propose a model for HlyIIR, interaction with the DNA.
<StructureSection load='2fx0' size='340' side='right'caption='[[2fx0]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2fx0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FX0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FX0 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fx0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fx0 OCA], [https://pdbe.org/2fx0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fx0 RCSB], [https://www.ebi.ac.uk/pdbsum/2fx0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fx0 ProSAT]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fx/2fx0_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fx0 ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Production of Bacillus cereus and Bacillus anthracis toxins is controlled by a number of transcriptional regulators. Here we report the crystal structure of B. cereus HlyIIR, a regulator of the gene encoding the pore-forming toxin hemolysin II. We show that HlyIIR forms a tight dimer with a fold and overall architecture similar to the TetR family of repressors. A remarkable feature of the structure is a large internal cavity with a volume of 550 A(3) suggesting that the activity of HlyIIR is modulated by binding of a ligand, which triggers the toxin production. Virtual ligand library screening shows that this pocket can accommodate compounds with molecular masses of up to 400-500 Da. Based on structural data and previous biochemical evidence, we propose a model for HlyIIR interaction with the DNA.


==About this Structure==
Crystal structure of Bacillus cereus HlyIIR, a transcriptional regulator of the gene for pore-forming toxin hemolysin II.,Kovalevskiy OV, Lebedev AA, Surin AK, Solonin AS, Antson AA J Mol Biol. 2007 Jan 19;365(3):825-34. Epub 2006 Oct 26. PMID:17097673<ref>PMID:17097673</ref>
2FX0 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FX0 OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
Crystal structure of Bacillus cereus HlyIIR, a transcriptional regulator of the gene for pore-forming toxin hemolysin II., Kovalevskiy OV, Lebedev AA, Surin AK, Solonin AS, Antson AA, J Mol Biol. 2007 Jan 19;365(3):825-34. Epub 2006 Oct 26. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17097673 17097673]
</div>
<div class="pdbe-citations 2fx0" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Bacillus cereus]]
[[Category: Bacillus cereus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Antson, A.A.]]
[[Category: Antson AA]]
[[Category: Kovalevskiy, O.V.]]
[[Category: Kovalevskiy OV]]
[[Category: Lebedev, A.A.]]
[[Category: Lebedev AA]]
[[Category: Solonin, A.S.]]
[[Category: Solonin AS]]
[[Category: transcriptional regulator]]
 
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Latest revision as of 00:56, 21 November 2024

Crystal Structure of HlyIIR, a Hemolysin II transcriptional Regulator

2fx0, resolution 2.40Å

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