2guu: Difference between revisions

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New page: left|200px<br /><applet load="2guu" size="350" color="white" frame="true" align="right" spinBox="true" caption="2guu, resolution 1.86Å" /> '''crystal structure of...
 
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[[Image:2guu.gif|left|200px]]<br /><applet load="2guu" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2guu, resolution 1.86&Aring;" />
'''crystal structure of Plasmodium vivax orotidine 5-monophosphate decarboxylase with 6-aza-UMP bound'''<br />


==About this Structure==
==crystal structure of Plasmodium vivax orotidine 5-monophosphate decarboxylase with 6-aza-UMP bound==
2GUU is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax] with <scene name='pdbligand=UP6:'>UP6</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GUU OCA].  
<StructureSection load='2guu' size='340' side='right'caption='[[2guu]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2guu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GUU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GUU FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UP6:6-AZA+URIDINE+5-MONOPHOSPHATE'>UP6</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2guu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2guu OCA], [https://pdbe.org/2guu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2guu RCSB], [https://www.ebi.ac.uk/pdbsum/2guu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2guu ProSAT]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/2guu_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2guu ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Plasmodium vivax]]
[[Category: Plasmodium vivax]]
[[Category: Protein complex]]
[[Category: Amani M]]
[[Category: Amani, M.]]
[[Category: Arrowsmith CH]]
[[Category: Arrowsmith, C.H.]]
[[Category: Bochkarev A]]
[[Category: Bochkarev, A.]]
[[Category: Dong A]]
[[Category: Dong, A.]]
[[Category: Edwards AM]]
[[Category: Edwards, A.M.]]
[[Category: Hui R]]
[[Category: Hui, R.]]
[[Category: Koeieradzki I]]
[[Category: Koeieradzki, I.]]
[[Category: Kotra L]]
[[Category: Kotra, L.]]
[[Category: Lew J]]
[[Category: Lew, J.]]
[[Category: Pai EF]]
[[Category: Pai, E.F.]]
[[Category: Sundararajan E]]
[[Category: SGC, Structural.Genomics.Consortium.]]
[[Category: Sundstrom M]]
[[Category: Sundararajan, E.]]
[[Category: Vedadi M]]
[[Category: Sundstrom, M.]]
[[Category: Wasney G]]
[[Category: Vedadi, M.]]
[[Category: Weigelt J]]
[[Category: Wasney, G.]]
[[Category: Zhao Y]]
[[Category: Weigelt, J.]]
[[Category: Zhao, Y.]]
[[Category: UP6]]
[[Category: 6-aza-ump]]
[[Category: odcase]]
[[Category: sgc]]
[[Category: structural genomics]]
[[Category: structural genomics consortium]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:08:41 2008''