2gzx: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
New page: left|200px<br /><applet load="2gzx" size="350" color="white" frame="true" align="right" spinBox="true" caption="2gzx, resolution 2.20Å" /> '''Crystal Structure of...
 
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2gzx.gif|left|200px]]<br /><applet load="2gzx" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2gzx, resolution 2.20&Aring;" />
'''Crystal Structure of the TatD deoxyribonuclease MW0446 from Staphylococcus aureus. Northeast Structural Genomics Consortium Target ZR237.'''<br />


==About this Structure==
==Crystal Structure of the TatD deoxyribonuclease MW0446 from Staphylococcus aureus. Northeast Structural Genomics Consortium Target ZR237.==
2GZX is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus] with <scene name='pdbligand=NI:'>NI</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GZX OCA].
<StructureSection load='2gzx' size='340' side='right'caption='[[2gzx]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Staphylococcus aureus]]
<table><tr><td colspan='2'>[[2gzx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_MW2 Staphylococcus aureus subsp. aureus MW2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GZX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GZX FirstGlance]. <br>
[[Category: Acton, T.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
[[Category: Fang, Y.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
[[Category: Hunt, J.F.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gzx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gzx OCA], [https://pdbe.org/2gzx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gzx RCSB], [https://www.ebi.ac.uk/pdbsum/2gzx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gzx ProSAT], [https://www.topsan.org/Proteins/NESGC/2gzx TOPSAN]</span></td></tr>
[[Category: Montelione, G.T.]]
</table>
[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
== Function ==
[[Category: Neely, H.]]
[https://www.uniprot.org/uniprot/A0A0H3JV42_STAAW A0A0H3JV42_STAAW]  
[[Category: Seetharaman, J.]]
== Evolutionary Conservation ==
[[Category: Tong, L.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Vorobiev, S.M.]]
Check<jmol>
[[Category: Wang, D.]]
  <jmolCheckbox>
[[Category: Xiao, R.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gz/2gzx_consurf.spt"</scriptWhenChecked>
[[Category: NI]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: deoxyribonuclease]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: dnase]]
  </jmolCheckbox>
[[Category: nesg]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gzx ConSurf].
[[Category: northeast structural genomics consortium]]
<div style="clear:both"></div>
[[Category: protein structure initiative]]
__TOC__
[[Category: psi]]
</StructureSection>
[[Category: structural genomics]]
[[Category: Large Structures]]
[[Category: tatd]]
[[Category: Staphylococcus aureus subsp. aureus MW2]]
[[Category: zr237]]
[[Category: Acton T]]
 
[[Category: Fang Y]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:11:22 2008''
[[Category: Hunt JF]]
[[Category: Montelione GT]]
[[Category: Neely H]]
[[Category: Seetharaman J]]
[[Category: Tong L]]
[[Category: Vorobiev SM]]
[[Category: Wang D]]
[[Category: Xiao R]]
Retrieved from "https://proteopedia.org/2gzx"