3srf: Difference between revisions

(6 intermediate revisions by the same user not shown)

Line 1:

~~'''Unreleased structure'''~~

The ~~entry 3srf~~ is ~~ON HOLD~~

==Human M1 pyruvate kinase==

== Structural highlights ==

<table><tr><td colspan='2'>[[3srf]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SRF OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=3SRF FirstGlance].

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.845Å</td></tr>

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=3srf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3srf OCA], [https://pdbe.org/3srf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3srf RCSB], [https://www.ebi.ac.uk/pdbsum/3srf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3srf ProSAT]</td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/KPYM_HUMAN KPYM_HUMAN] Glycolytic enzyme that catalyzes the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) to ADP, generating ATP. Stimulates POU5F1-mediated transcriptional activation. Plays a general role in caspase independent cell death of tumor cells. The ratio betwween the highly active tetrameric form and nearly inactive dimeric form determines whether glucose carbons are channeled to biosynthetic processes or used for glycolytic ATP production. The transition between the 2 forms contributes to the control of glycolysis and is important for tumor cell proliferation and survival.<ref>PMID:17308100</ref> <ref>PMID:18191611</ref> <ref>PMID:21620138</ref>

~~Authors~~: Morgan~~, H.P.,~~ O'Reilly, F., Palmer, R~~., McNae, I.W., Nowicki, M.W., Wear, M.A., Fothergill-Gilmore, L.A.,~~ Walkinshaw~~, M.D.~~

==See Also==

*[[Pyruvate kinase 3D structures|Pyruvate kinase 3D structures]]

~~Description~~: ~~Human M1 pyruvate kinase~~

== References ==

__TOC__

</StructureSection>

[[Category: Homo sapiens]]

[[Category: Large Structures]]

[[Category: Fothergill-Gilmore LA]]

[[Category: McNae IW]]

[[Category: Morgan HP]]

[[Category: Nowicki MW]]

[[Category: O'Reilly F]]

[[Category: Palmer R]]

[[Category: Walkinshaw MD]]

[[Category: Wear MA]]

Navigation menu

Page actions

Page actions

Personal tools

Navigation

Search

Tools

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 3srf is ON HOLD
+==Human M1 pyruvate kinase==
+<StructureSection load='3srf' size='340' side='right'caption='[[3srf]], [[Resolution|resolution]] 2.84&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3srf]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SRF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SRF FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.845&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3srf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3srf OCA], [https://pdbe.org/3srf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3srf RCSB], [https://www.ebi.ac.uk/pdbsum/3srf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3srf ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/KPYM_HUMAN KPYM_HUMAN] Glycolytic enzyme that catalyzes the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) to ADP, generating ATP. Stimulates POU5F1-mediated transcriptional activation. Plays a general role in caspase independent cell death of tumor cells. The ratio betwween the highly active tetrameric form and nearly inactive dimeric form determines whether glucose carbons are channeled to biosynthetic processes or used for glycolytic ATP production. The transition between the 2 forms contributes to the control of glycolysis and is important for tumor cell proliferation and survival.<ref>PMID:17308100</ref> <ref>PMID:18191611</ref> <ref>PMID:21620138</ref>
-Authors: Morgan, H.P., O'Reilly, F., Palmer, R., McNae, I.W., Nowicki, M.W., Wear, M.A., Fothergill-Gilmore, L.A., Walkinshaw, M.D.
+==See Also==
+*[[Pyruvate kinase 3D structures|Pyruvate kinase 3D structures]]
-Description: Human M1 pyruvate kinase
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Homo sapiens]]
+[[Category: Large Structures]]
+[[Category: Fothergill-Gilmore LA]]
+[[Category: McNae IW]]
+[[Category: Morgan HP]]
+[[Category: Nowicki MW]]
+[[Category: O'Reilly F]]
+[[Category: Palmer R]]
+[[Category: Walkinshaw MD]]
+[[Category: Wear MA]]